Gene Smed_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3718 
Symbol 
ID5318531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp161836 
End bp162630 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID640775531 
Productresponse regulator receiver protein 
Protein accessionYP_001312464 
Protein GI150375868 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGACG AACATATGAG CGGCGATGTG TTCTGGAATA TCCTGGCGCA AGCGATCAGC 
GCCACCGGCA CCGATAGGCA TGTCGACCGG CTGATCGACA TGGTCGGCGC TGTGGTGCCG
CAGAACCTCA TCACGGTCAC GCGCTATTCC GCCACCCGCA GGCCGGAATT CATTAAGCAC
CGCGGTTACT CCGACGAGAT GGTGGCGCGT TACCTCGATA CCTATTATGT GTTCGATCCC
TTCTATGCCT ATTGGCGCCT GACCAGGCGC GCAGGGATCG TGCCCCTCAA GAGCCTGGCG
GACGGCGCTC CCAAACGCGG CCGCTACATA GCGGAGTTCC TGGCGCAATC CGAAATCTGC
GACGAGGTCG GCATATTGCT GGAAGACGGC GACGACTGGT GCCTCGGCAT ATTTCTCGAC
CGCTCCACAT CGATGTTCAG CGATGGCGAG GTCGCGGCGC TGTCCGGCCG CTTTCCGGTT
TTCGAAGCAC TTCATGCAAC CGATACCCGC ACGCGCGACC CCAATCTCAG GCGGACCAGC
ATGCCCGAAG CCATGGGAGA AGCGCCGGTG AACGCCGTCC AGGCTTCCCT CATCCTGTGG
CCGGGCCTGA CGGCACGGGA GCGGGAACTC GTCGATCTCA TTCTGCAAGG GCATCCGAAC
GCCACGATCG CGTCCAGGCT CGGGATCGCA CCGGGCACGG TCAAGAACCA CCGGGCGCGC
ATCTATGAAA AGCTGGACAT CACAACCGAG CGCGAACTCT TCCTGCAGGT CTTCCAGCAA
TACCGGCTTT CTTAA
 
Protein sequence
MVDEHMSGDV FWNILAQAIS ATGTDRHVDR LIDMVGAVVP QNLITVTRYS ATRRPEFIKH 
RGYSDEMVAR YLDTYYVFDP FYAYWRLTRR AGIVPLKSLA DGAPKRGRYI AEFLAQSEIC
DEVGILLEDG DDWCLGIFLD RSTSMFSDGE VAALSGRFPV FEALHATDTR TRDPNLRRTS
MPEAMGEAPV NAVQASLILW PGLTAREREL VDLILQGHPN ATIASRLGIA PGTVKNHRAR
IYEKLDITTE RELFLQVFQQ YRLS