Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3703 |
Symbol | |
ID | 5318423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 143824 |
End bp | 145320 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775516 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001312449 |
Protein GI | 150375853 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCA TTTTTGCGCG CACAGCCTTT CACGATGCGT TGAAAAAACT GAACGACCGC CAATTGCTGC GGGAGCTTGC CTATGTCGGC GGCCGCTGGG TTGCCGGACG GGAGGGTTCC AGCCTTGAGG TGAGCGATCC GGCCAGCGGC GCGTCACTCG CCTTCGTCGC CTCGCTCGAC GCTGCACAGA CGTCGGAAGC GATCGACGCG GCGGAAAAAG CGTTCAGCTC CTGGCGTAAC ATGCTGCCGC AAGCACGCGC TGCGATTCTG CGCAAATGGC ACGGCCTCAT GCTCGACGCC CGGGAGGATC TCGCTCTTTT GATGACCCTG GAGCAAGGCA AGCCGCTCGC CGAGTCGCGC GGCGAGATCG AGTATGCGGC TTCGTTCATC GAGTGGTATG CCGAAGAGGG CAAGCGCCTC AATGCCGAAA GCGTGACGAG CCATCTGGCC GATGCCGAAA TGATCGTGCG ACGCGAAGCA CTCGGAGTCG TTGGCATCGT CACGCCCTGG AACTTCCCTT CCGCGATGAT CACGCGCAAG GCGGCCGCGG CCCTTGCTGC AGGCTGCACC GTGGTGGCGC ACCCCTCGTC CGAGACGCCC CTCTCGGCGC TCGCTCTGGC CGAACTCGGA GAGCGGGCCG GGCTTCCGGC TGGCGTCTTC AATGTCGTCA CCGGCAAGGC GGCAACGATC GTCGGACGAA TGTGCGAGGA CGCACGGGTG CGCGCCATGA GCTTCACCGG CTCGACCGAA ATCGGCCGCC TGATCGCCTC GCAATGCGCG CCGACGATGA AGCGGCTGGT GATGGAGCTC GGCGGTCATG CCCCCCTTAT TGTCTTCGCC GATGCGAATG TCGAAAAGGC TGCCGATATT GCGATAGCCG CGAAATTCGC CACTTCCGGC CAGGATTGCC TTGCCGCCAA TCGGATCTAC GTCGAACGGC CCGTGCTCAA GGCATTCCAG GAAGCCTTTG CCGCGCGGAT TGCCCGTTTG GAAGTCGGGT CCGGGATGGA ACCGGGTACG GATATCGGAC CGCTCATGCA CGAACGTGCC GTCGCCAAGG TAGAGGAACA AGTTGCGGAC GCATTGAAAT CGGGCGCCAG GCTTTCCGCC GGCGGCAAGC GACACGCCGC CGGGCCGCTC TTCTTCCAGC CGACCCTTCT GACGGATGTG CCGGACGACG CGCTGATCAT GCGCGAGGAG ACCTTCGGCC CTGTTGCGGC CATCTCCGCC TTCGATAGCG AAGACGAAGT GGTCGCGCGG GCGAACGACA CGGAATACGG GCTTGTCGCC TATGTCGTAA CCGATAACGG CGCCCGCCAG ATGCGGCTCG CCCGCGCCCT CGAATACGGC ATGGTAGCGA TCAATCGGGT GAAGATCACC GGTGGGCCGA TCCCCTTCGG TGGCTGGAAG CAATCGGGCC TCGGCCGCGA AGGCTCCCGC CACGGCATGG AGGCTTTCAC CGAACTCAAA TATCTCTGCA TCGACACCGC CGCCTGA
|
Protein sequence | MTAIFARTAF HDALKKLNDR QLLRELAYVG GRWVAGREGS SLEVSDPASG ASLAFVASLD AAQTSEAIDA AEKAFSSWRN MLPQARAAIL RKWHGLMLDA REDLALLMTL EQGKPLAESR GEIEYAASFI EWYAEEGKRL NAESVTSHLA DAEMIVRREA LGVVGIVTPW NFPSAMITRK AAAALAAGCT VVAHPSSETP LSALALAELG ERAGLPAGVF NVVTGKAATI VGRMCEDARV RAMSFTGSTE IGRLIASQCA PTMKRLVMEL GGHAPLIVFA DANVEKAADI AIAAKFATSG QDCLAANRIY VERPVLKAFQ EAFAARIARL EVGSGMEPGT DIGPLMHERA VAKVEEQVAD ALKSGARLSA GGKRHAAGPL FFQPTLLTDV PDDALIMREE TFGPVAAISA FDSEDEVVAR ANDTEYGLVA YVVTDNGARQ MRLARALEYG MVAINRVKIT GGPIPFGGWK QSGLGREGSR HGMEAFTELK YLCIDTAA
|
| |