| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3698 |
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| Symbol | |
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| ID | 5318307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 139065 |
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| End bp | 139784 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775511 |
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| Product | ectoine/hydroxyectoine ABC transporter permease protein EhuC |
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| Protein accession | YP_001312444 |
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| Protein GI | 150375848 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGGC GGTGTGGGCG GCGGCAACCA GGCCCAAATT CTGACTGGAA CAACGAAACG
ATGATCGACT GGTCCGGCTA TATCGGATTG ATCCTGCAGG GCGCCTGGGT GACCGTGCAA
CTGACCCTCA TGGGCTCGGC GCTGGCCGTC GTGGTGGCTT TCGCGGCCGG TCTCGGGCGG
CTCAGCCGGT TCATGGCCGT TCGTGCGCTC GCCACCACAT ATATAGAATT CTTCCGCGGC
ACCTCGATTT TCGTGCAACT GTTCTGGGCT TATTTCGTCC TGCCTTTTGC CGGCATCACG
CTGACGCCGC TGCAGGCAGG TGTGCTCGCT CTCGGGCTGA ATGTCGGCGC CTATGGCGCT
GAGGTCGTGC GGGGAGCGGT GAAAGCGATC GGCCGCGAGC AGCGTGAGGC CTGCATCGCG
CTCAATCTCA CGCGTTTTCA GGCGATGCGC CACATCATCC TGCCCCAAGC GCTCCCGCTG
ATGCTGCCGA CCTTCGGCAA CAATGCCATC GAGCTCTTGA AAGGAACTGC GGTGGTTTCT
CTGATTTCGC TCACCGACAT GACCTTTCAG GCTCAGGTGG TGCGCGCCCA AACCGGCAGC
ACGCTGATCC CCTTCGCGAC CATCCTGCTG CTTTACTTCG CCATGGCCTG GCTGATCTCG
ATGGGCATGC GCTGGCTCGA GAGGCGCGTC AGTCGCGGCC TCGACGGTGT GAGGGTCTGA
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| Protein sequence | MGRRCGRRQP GPNSDWNNET MIDWSGYIGL ILQGAWVTVQ LTLMGSALAV VVAFAAGLGR
LSRFMAVRAL ATTYIEFFRG TSIFVQLFWA YFVLPFAGIT LTPLQAGVLA LGLNVGAYGA
EVVRGAVKAI GREQREACIA LNLTRFQAMR HIILPQALPL MLPTFGNNAI ELLKGTAVVS
LISLTDMTFQ AQVVRAQTGS TLIPFATILL LYFAMAWLIS MGMRWLERRV SRGLDGVRV
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