| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3697 |
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| Symbol | |
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| ID | 5318306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 138400 |
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| End bp | 139062 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775510 |
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| Product | ectoine/hydroxyectoine ABC transporter permease protein EhuD |
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| Protein accession | YP_001312443 |
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| Protein GI | 150375847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGG ATTGGGAATT CGTCCGCCAG ATCATGCCGA CCCTCATCGA GGGGCTGAAG
ATCACGATTC TTGCCACCGC GCTCGGCGCG GTCGTTGCCG CGGTGATCGG CCTTGTCTTC
GCCATCCTGC GGATGACTGC GCCGAAGCCG ATCGCGCGCG CCACGAGCTT CATCGTCGAG
TTCATCCGCG GCACGCCGCT GCTCGTGCAG CTCTACTTCA TCTTCTACGT GCTTCCGGAC
GTCGGAATCC GCCTGCCTGC TCTGGTCGCC GGCGTCATCG GGCTCGGAAT ACACTACGGC
ACCTATGCCG CCGAGGTTTA CCGTGCCGGC ATTGAAAACG TGCCGCGCGG ACAATGGGAA
GCGGCCAAGG CAACAAACCT GACCGCTCGC CAGACCTGGA TCCACGTCAT CCTGCCGCAG
GCGATCCCGC CGATGATTCC CGCCCTCGCA AACTACCTGA TCGCCATGTT CAAGGAGACG
CCGCTGCTGT CGGCGATCAC CGTGCTTGAA CTGATGAATC AGGCCAAGAG CATCGCCAAC
AGCAACTATC GCTATATCGA GCCGATGACG CTGGTGGGCG TATTCTTCCT GATCATGAGC
CTGATCTCGG TCGTGTTCCT GCGCTGGCTG GAAGAGCGTT ATTCCCGTGT GGAGCAACGC
TGA
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| Protein sequence | MEWDWEFVRQ IMPTLIEGLK ITILATALGA VVAAVIGLVF AILRMTAPKP IARATSFIVE
FIRGTPLLVQ LYFIFYVLPD VGIRLPALVA GVIGLGIHYG TYAAEVYRAG IENVPRGQWE
AAKATNLTAR QTWIHVILPQ AIPPMIPALA NYLIAMFKET PLLSAITVLE LMNQAKSIAN
SNYRYIEPMT LVGVFFLIMS LISVVFLRWL EERYSRVEQR
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