| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3696 |
|---|
| Symbol | |
|---|
| ID | 5318305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 137615 |
|---|
| End bp | 138400 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640775509 |
|---|
| Product | ectoine utilization protein EutA |
|---|
| Protein accession | YP_001312442 |
|---|
| Protein GI | 150375846 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3473] Maleate cis-trans isomerase |
|---|
| TIGRFAM ID | [TIGR02990] ectoine utilization protein EutA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCC CCGTTGCGCT ATCGCTTGCC TCGCGGAGCC CGCGGCTCGA CGCCCGACCC
GTCAATAGAC GGATCGGGCT CGTCATCCTC GCCACCGATC ATACGACGGA GGTCGATTTT
CAACGGATGG TCGCATCGGA CCGGATCGGG GTCTATGTCA CCCGTATCCC CTATGCCAAT
CCGGTGACGC CGGAGAACCT GCGGGCAATG CAGCCGTCGC TAACCGAAGC CGCGGCCCTG
ATCCTGCCCG ACGAGACCCT CGACGTCGTC ATGTATTCCT GTACCTCGGC CTCCGTGGTC
ATTGGAGACG AGGAGGTGGC TGCGGCGATA ACAGCCGCGA AGCCGGGGGC GACCGTCGTC
ACGCCGACCG ATGCCTCGGT CCGGGGTCTG AGGGCTCTGG GCGCCAAGAA CATTTCGGTT
CTTACCCCTT ACACGATCGA GACCAGCAGG CCCATGGCCG GCTATTTCGC TGAGCGTGGA
TTCGCTATCG ACAGGTTTAC CTGCCTGGGT CTCACGGACG ATCGCGAGAT GGCGCGGATC
CGGCCCGAGG AGATCGTGGC CTTCGCGAAG GAAGCCGCAG CAGCGGAATC GGATGCGCTC
TTCATCTCCT GCACCGCTGT GCGCGCGGCA GTCAAAATCG CCGAAATCGA ACAGGCGATC
GGGAAGCCGG TCGTCAGCAG CAATTACGCC ACCGCCTGGG CCTGCCTGCG TCTTTGCGGC
GACCAGGAAG CACGCCCGCA TCTCGGCCGG CTGATGGAGC TGCCGCTCGA AGGAGAACGA
CTGTGA
|
|---|
| Protein sequence | MKSPVALSLA SRSPRLDARP VNRRIGLVIL ATDHTTEVDF QRMVASDRIG VYVTRIPYAN
PVTPENLRAM QPSLTEAAAL ILPDETLDVV MYSCTSASVV IGDEEVAAAI TAAKPGATVV
TPTDASVRGL RALGAKNISV LTPYTIETSR PMAGYFAERG FAIDRFTCLG LTDDREMARI
RPEEIVAFAK EAAAAESDAL FISCTAVRAA VKIAEIEQAI GKPVVSSNYA TAWACLRLCG
DQEARPHLGR LMELPLEGER L
|
|---|
| |