| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3693 |
|---|
| Symbol | |
|---|
| ID | 5318302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 134401 |
|---|
| End bp | 135582 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775506 |
|---|
| Product | ectoine utilization protein EutD |
|---|
| Protein accession | YP_001312439 |
|---|
| Protein GI | 150375843 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | [TIGR02993] ectoine utilization protein EutD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC CCAACCTCAA ATTCTCCCTT GAGGAATATG AAGCGCGGCT CGCGAAGACC
CGAAAGGCCA TGGAGGCGAA AGGCGTCGAC CTCCTGATCG TGAGCGACCC CTCAAACATG
GCCTGGCTCA CAGGCTATGA CGGCTGGTCC TTCTACGTAC ATCAGGCGGT CATCGTACCG
CCTTCGGGCG AACCGATCTG GTTCGGCCGC GGCCAGGATG CCAATGGGGC GAAGTTTACC
GCCTATCTCA AACACGAGAA CATCATCGGC TACCCCGATC ACTACGTGCA GTCGACCGAA
CGTCACCCCA TGGACTATCT CTCGGGTATC CTCGCCGACC GCGGGTTCGG TTCGCTCCGC
ATCGGTGTAG AAATGGACAA TTACTGGTTC TCGGCCGCTG CGTTTGCGTC GCTGCAGAAG
CGCCTCCCCA ATGCGCGTTT CGTCGACACG ACGGCGCTGG TGAACTGGCA GCGTGCCGTC
AAAAGCGAGA CGGAAATCAA ATATATGCGC AACGCCGCCC GCATTGTCGA AGCCATGCAT
CAGCGCATCT TCGACAAGAT CGAAGTGGGC ATGCGCAAAT GCGATCTGGT GGCGGAAATC
TACGATGCGG GCACGCGGGG CGTTGATGGC ATCGGCGGCG ACTATCCGGC AATCGTGCCG
CTTCTCCCTT CCGGCGTCGA GGCTTCAGCG CCGCATCTCA CCTGGGACGA CCGGCCTATG
AAGCGAGGCG AGGGCACCTT TTTCGAGATC GCCGGCTGCT ACAATCGCTA TCACCTGCCG
CTGTCGCGCA CGGTGTTCCT GGGCAAGCCG ACCCAGGCCT TCCTCGACGC CGAGAAGGCG
ACTCTCGAAG GCATGGAGGC GGGGCTCGCA GTCGCCAAGC CCGGCAATAC CTGTGAGGAC
ATCGCGAACG CGTTCTTCTC CGTGTTGAAG AAATACGGGA TCGTCAAAGA CAACCGTACC
GGCTATCCCA TCGGTCTTTC CTATCCGCCG GACTGGGGCG AGCGCACGAT GAGCCTGCGC
TCGGGCGACA GGACGGAACT GAAGCCGGGA ATGACTTTCC ACTTCATGAC GGGCCTCTGG
CTCGAGGACA TGGGTTTCGA GACGACCGAA AGCATTCTCA TCACCGAGAG CGGCGTCGAG
TGCCTTGCCT CCGTGCCGCG CAAGCTGATG GTCAAGGACT GA
|
|---|
| Protein sequence | MTQPNLKFSL EEYEARLAKT RKAMEAKGVD LLIVSDPSNM AWLTGYDGWS FYVHQAVIVP
PSGEPIWFGR GQDANGAKFT AYLKHENIIG YPDHYVQSTE RHPMDYLSGI LADRGFGSLR
IGVEMDNYWF SAAAFASLQK RLPNARFVDT TALVNWQRAV KSETEIKYMR NAARIVEAMH
QRIFDKIEVG MRKCDLVAEI YDAGTRGVDG IGGDYPAIVP LLPSGVEASA PHLTWDDRPM
KRGEGTFFEI AGCYNRYHLP LSRTVFLGKP TQAFLDAEKA TLEGMEAGLA VAKPGNTCED
IANAFFSVLK KYGIVKDNRT GYPIGLSYPP DWGERTMSLR SGDRTELKPG MTFHFMTGLW
LEDMGFETTE SILITESGVE CLASVPRKLM VKD
|
|---|
| |