| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3688 |
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| Symbol | |
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| ID | 5318806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 128469 |
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| End bp | 129443 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640775501 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001312434 |
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| Protein GI | 150375838 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.359899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA GACTGTTGAC GCTAATCGGT GCCACCGCGA CCATCCTGGC ATCGGCCTTA
TCGGCCCATG CCCAGACGGC GCTCAAATGG GCCCATGTCT ACGAAACGTC GGAGCCGTTC
CATACCGAGT CCGTCTGGGC GGCGGAAGAG ATCGCCAAAC GCACCGAGGG GCGCTACAAG
ATCGATGTCT TCCCGGCGTC GCAGCTCGGC AAGGAAGCCG ATATCAATCA AGGCCTGAAG
CTCGGCACCG TCGACATCAT CATTTCAGGA TCGAGCTTCG CCGCGCGCGA TCATGCGCCC
ATCGGCGTCA CCTATTTTCC CTATATCTTC CGCGACCCGG CCCATATGAT CGCCTACACC
AAGAGCGATG TCTTCAAGCG CCTTGCCGCA GGATATGAGG AAGCCTCGGG CAACCACATC
ACCGCCGTCA CCTATTACGG GACGCGTCAC ACCACATCGA ACAGGCCGAT TACCAAATGC
GCCGACATGC AGGGCCTGAA GATGCGCGTT CCGGACGTGC CGGCCTATCT CGCCATGCCG
CGGGCCTGCG GTGCCAACAC AACGCCGATC GCTTTTGCCG AGGTCTATCT CGCACTCCAG
AACGGAACGG TCGAAGCGCA GGAAAATCCG CTGACGACGA TAGAGGCGAA GAAGTTCTTC
GAAGTGCAGA AGCATATCGT GCTGACCGGC CACATCGTCG ATCACCTGAA CACGGTCGTT
TCGAAGAACC TCTGGTCACA GCTCTCCGAT GCCGACAAGC AGATCTTTAC CGAGGTTATG
CAGGAGGCGG CCGAGCGCGC CACCAAGATC ATCGAGGAGC GTGAGAAGGA ACTTGTAGCG
ACCTTCAAGG AACGCGGTAT CGAAGTAACC GAGGTCGACA GGGCCGATTT CGAAAAAACC
GTCAATGAGA AGGTCGCGCT CGAGGATTTC GGCTACGTCA AGGAAGACTG GGAGGCCATC
CGCGCCGTCA AGTGA
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| Protein sequence | MTIRLLTLIG ATATILASAL SAHAQTALKW AHVYETSEPF HTESVWAAEE IAKRTEGRYK
IDVFPASQLG KEADINQGLK LGTVDIIISG SSFAARDHAP IGVTYFPYIF RDPAHMIAYT
KSDVFKRLAA GYEEASGNHI TAVTYYGTRH TTSNRPITKC ADMQGLKMRV PDVPAYLAMP
RACGANTTPI AFAEVYLALQ NGTVEAQENP LTTIEAKKFF EVQKHIVLTG HIVDHLNTVV
SKNLWSQLSD ADKQIFTEVM QEAAERATKI IEEREKELVA TFKERGIEVT EVDRADFEKT
VNEKVALEDF GYVKEDWEAI RAVK
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