| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3686 |
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| Symbol | |
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| ID | 5318804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 126416 |
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| End bp | 127822 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775499 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001312432 |
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| Protein GI | 150375836 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.125762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGC TCGTCGTTTC CTTTCTCTTC CTGATGCTGG TCGGCGTTCC CGTGGCTATC
TCCATGGCTT CGGCGTCGGT TCTCTATCTG GTCTTCTACA ATGTCGCGCC CGACATCATC
GCAGCGCAGC GGATGATCGC AGGCGTCGAG AGCTTTCCGC TGCTTGCGGT GCCGTTTTTC
ATTCTCGCCG GAAATCTTAT GAATTCCGCC GGCGTCACCG GGCGCATCTA TTCCTTCGCC
GTGGCTCTCG TCGGCTGGAT GAAGGGTGGG CTGGCCCAGG TCAACATCGT CGGCTCGGTG
ATCTTCTCGG GCATGTCGGG CACCGCGCTT GCGGATGCTG CCGGCATAGG CACGATCGAG
ATCAAGGCAA TGAAGGATCA CGGCTATCCG GTGGAGGCGG CGGTCGGCGT CACCGCGGCA
TCCGCGACGC TCGGACCCAT TTTCCCGCCG TCACTGCCCT TTGTCATCTA CGGCATGATG
GCGAATGTCT CGATCGGGGC GCTTTTCATG GCGGGTGTCG TGCCGGGCGT GGTGATGACG
GTGCTGATGA TGCTGACCGT GGCGATCTTT GCCTATAAGC GCGGTTGGGG CTCGGACACG
CCGTTCGAGA TGAAGCGGCT GCTTTCGGCC TCGCTCGAGG TCGTCGTCGT GCTTGCAGTG
CCGCTTCTCG TCTACGCCCT GATGTCGGCC GGGCTGTCAA TGAACCTTGC GGTCGGGATC
GCGCTGGTGG TTCTGCTCGC TCTCGACTGG TACTTCGACT TCTCCGCCGT CATGGCGCTG
ATGACGCCCA TTATTCTGAT CGGCGGCATG ACCATGGGGT GGTTCACGCC AACGGAGGCC
GCCGTCGCGG CCGTGATCTG GTCGCTGTTT CTCGGGCTGG TGCGATACCG GACCATGACG
ATGTCGACGC TCGCCCGGGC GACATTCGAC ACGATCGAAA CGACCGCGTC AGTGCTCTTC
ATCGTCACGG CCGCGTCGAT CTTCGCATGG CTCCTGACAG TCAGCCAGGC CGCGCAGATG
CTCTCCGGCG CGATCCTGAC GATCACCGAC AACAAATGGG TCTTCCTGAT CCTGGTGAAC
CTGTTGATGC TGTTCGTCGG CTGCTTCCTC GACACGATTG CCGCGATCAC CATATTGGTG
CCGATCCTGC TGCCGCTGAC CGCTCAGTTC GGCATAGACC CGGTGCATTT CGGCCTGATC
ATGACGCTCA ATCTGATGAT CGGTCTGCTT CACCCGCCCC TTGGTATGGT CCTTTTCGTG
CTTTCGCGGG TGGCGAAGCT CTCGGTCGAG CGGACGACGA TGGCAATCCT GCCATGGCTC
GTGCCGCTGT TCATCGCTCT CATTCTGATC ACCTTCGTGC CCGCTGTCGT GCTCTGGCTG
CCGCAGACGG TGGGCCTGAT CCGCTGA
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| Protein sequence | MLLLVVSFLF LMLVGVPVAI SMASASVLYL VFYNVAPDII AAQRMIAGVE SFPLLAVPFF
ILAGNLMNSA GVTGRIYSFA VALVGWMKGG LAQVNIVGSV IFSGMSGTAL ADAAGIGTIE
IKAMKDHGYP VEAAVGVTAA SATLGPIFPP SLPFVIYGMM ANVSIGALFM AGVVPGVVMT
VLMMLTVAIF AYKRGWGSDT PFEMKRLLSA SLEVVVVLAV PLLVYALMSA GLSMNLAVGI
ALVVLLALDW YFDFSAVMAL MTPIILIGGM TMGWFTPTEA AVAAVIWSLF LGLVRYRTMT
MSTLARATFD TIETTASVLF IVTAASIFAW LLTVSQAAQM LSGAILTITD NKWVFLILVN
LLMLFVGCFL DTIAAITILV PILLPLTAQF GIDPVHFGLI MTLNLMIGLL HPPLGMVLFV
LSRVAKLSVE RTTMAILPWL VPLFIALILI TFVPAVVLWL PQTVGLIR
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