Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3679 |
Symbol | |
ID | 5318786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 117527 |
End bp | 118084 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640775492 |
Product | hypothetical protein |
Protein accession | YP_001312425 |
Protein GI | 150375829 |
COG category | [S] Function unknown |
COG ID | [COG5381] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.744055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00232775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGACCT TGTATGGACT GGAGGATCTC GCCGTCGGGC CGGGCGAGAA TGTGACGAAA CTCCGTCTCT TCGACGGCCC GCTCGATCTC GGGTGGAAAC ATTGCGCGAT GACCTCCGAT TTTGTGGCCG AGTTCGCTGC CCTGCGCTAC AAAACGTCTC GCGTCGTCTA CAAGGAGGTG CGTCACAATG TCGGCTATCT GACCAATGAG CTGATAGAGA ATGCTGTGAA ATTCCGCGCT GGCGGGGAAA TCGTCGTGGA GGCATCGATC GCCTCCAACA CATTTCGGAC AAAAGTTTCC AATCTCGTGG ACAAAGGAAC AGCCGACACG TTCCGCCACA TCCTTTCGGA AATAACGATA GGAGATCCAT CCGACCTTCT GATACAGCGG ATAGAGGCAA ATGCAACAGG TTCGGGATCG GGTTCCGGGC TTGGACTTCT CACCCTCATG AGCGATTATG GTGCTCACTT CGCGTGGGTT TTTGGATCCG GCGAAGAGGA TGGCAAGATC CCGCTGGAGA CCTATGCCTC AATCGCAATT CCCGACCTCT CGAATTGA
|
Protein sequence | MTTLYGLEDL AVGPGENVTK LRLFDGPLDL GWKHCAMTSD FVAEFAALRY KTSRVVYKEV RHNVGYLTNE LIENAVKFRA GGEIVVEASI ASNTFRTKVS NLVDKGTADT FRHILSEITI GDPSDLLIQR IEANATGSGS GSGLGLLTLM SDYGAHFAWV FGSGEEDGKI PLETYASIAI PDLSN
|
| |