Gene Smed_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3678 
Symbol 
ID5318785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp117174 
End bp117527 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content56% 
IMG OID640775491 
Producthypothetical protein 
Protein accessionYP_001312424 
Protein GI150375828 
COG category[S] Function unknown 
COG ID[COG5439] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.488744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00469689 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCACCG AATACATGGA AATCAAGGAA GACGAATATC GCGTTTGGTC GGAAGGAAAC 
GACATCTATT TCGACGGGAC GATGCGCCTG CCGAGCACCG AGGCCTATGC GCCGATCTTC
GCCCTCGTGA CGAGCGTGCT CGAAGCCGAG CCGGAGCGCA TGACTGTCGA TCTCACGGGG
CTGCAGTTTC TTAATTCTTC GGGAATCAAC CTGCTCGCCA AGCTCACCAT CGAAGCACGC
AAACGGCCGA ACATACAGTT CACTGTTCGC GGAAGCTCAG AATTCCCCTG GCAGTCGAAA
TCCCTGCCGA ATCTTAAAAA ACTCCATCCG GGTGTCGACC TGAGGCTAGG CTGA
 
Protein sequence
MGTEYMEIKE DEYRVWSEGN DIYFDGTMRL PSTEAYAPIF ALVTSVLEAE PERMTVDLTG 
LQFLNSSGIN LLAKLTIEAR KRPNIQFTVR GSSEFPWQSK SLPNLKKLHP GVDLRLG