Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3678 |
Symbol | |
ID | 5318785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 117174 |
End bp | 117527 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640775491 |
Product | hypothetical protein |
Protein accession | YP_001312424 |
Protein GI | 150375828 |
COG category | [S] Function unknown |
COG ID | [COG5439] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.488744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00469689 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCACCG AATACATGGA AATCAAGGAA GACGAATATC GCGTTTGGTC GGAAGGAAAC GACATCTATT TCGACGGGAC GATGCGCCTG CCGAGCACCG AGGCCTATGC GCCGATCTTC GCCCTCGTGA CGAGCGTGCT CGAAGCCGAG CCGGAGCGCA TGACTGTCGA TCTCACGGGG CTGCAGTTTC TTAATTCTTC GGGAATCAAC CTGCTCGCCA AGCTCACCAT CGAAGCACGC AAACGGCCGA ACATACAGTT CACTGTTCGC GGAAGCTCAG AATTCCCCTG GCAGTCGAAA TCCCTGCCGA ATCTTAAAAA ACTCCATCCG GGTGTCGACC TGAGGCTAGG CTGA
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Protein sequence | MGTEYMEIKE DEYRVWSEGN DIYFDGTMRL PSTEAYAPIF ALVTSVLEAE PERMTVDLTG LQFLNSSGIN LLAKLTIEAR KRPNIQFTVR GSSEFPWQSK SLPNLKKLHP GVDLRLG
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