Gene Smed_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3677 
Symbol 
ID5318784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp116553 
End bp116972 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content61% 
IMG OID640775490 
Producthypothetical protein 
Protein accessionYP_001312423 
Protein GI150375827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.566857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00495452 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAATC TGATCATCAA AGGTGCCATT GTTCTGGGTG TTGGACTCGG CTGTTTCGCT 
GCTCCCGCAG CAGCGCAGAG CACGACCAAG AACAGCGCCG TAACCGGCGC AGCCGGCGGA
GCTGCTGCAG GTGCAGTCGT AGGCGGACCT GTCGGGGCTG CCGTTGGAGG CGTCGCAGGA
GCCGTTGCGG GTGCGGCCAT AGACCCGCCG CCGCCGAAGA TCATTGAGTA TGTCGAGACG
CAGCCGCTGC CGGCGGAGCC GGTGGTGGTT CAACAGGAGA TCGTCGTCGG AAAACCGCTG
CCTGAAACAG TGGTTGTTAC GCCGATCCCT GACGATTCGC GTTATGCCTA TGCGGTCGTC
AACGAAAAAC GCGTCATCGT CGAGCCGAAG AGCCGAACGG TAGTGCAGGT CGTCCAGTAA
 
Protein sequence
MKNLIIKGAI VLGVGLGCFA APAAAQSTTK NSAVTGAAGG AAAGAVVGGP VGAAVGGVAG 
AVAGAAIDPP PPKIIEYVET QPLPAEPVVV QQEIVVGKPL PETVVVTPIP DDSRYAYAVV
NEKRVIVEPK SRTVVQVVQ