Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3677 |
Symbol | |
ID | 5318784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 116553 |
End bp | 116972 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775490 |
Product | hypothetical protein |
Protein accession | YP_001312423 |
Protein GI | 150375827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.566857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00495452 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAATC TGATCATCAA AGGTGCCATT GTTCTGGGTG TTGGACTCGG CTGTTTCGCT GCTCCCGCAG CAGCGCAGAG CACGACCAAG AACAGCGCCG TAACCGGCGC AGCCGGCGGA GCTGCTGCAG GTGCAGTCGT AGGCGGACCT GTCGGGGCTG CCGTTGGAGG CGTCGCAGGA GCCGTTGCGG GTGCGGCCAT AGACCCGCCG CCGCCGAAGA TCATTGAGTA TGTCGAGACG CAGCCGCTGC CGGCGGAGCC GGTGGTGGTT CAACAGGAGA TCGTCGTCGG AAAACCGCTG CCTGAAACAG TGGTTGTTAC GCCGATCCCT GACGATTCGC GTTATGCCTA TGCGGTCGTC AACGAAAAAC GCGTCATCGT CGAGCCGAAG AGCCGAACGG TAGTGCAGGT CGTCCAGTAA
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Protein sequence | MKNLIIKGAI VLGVGLGCFA APAAAQSTTK NSAVTGAAGG AAAGAVVGGP VGAAVGGVAG AVAGAAIDPP PPKIIEYVET QPLPAEPVVV QQEIVVGKPL PETVVVTPIP DDSRYAYAVV NEKRVIVEPK SRTVVQVVQ
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