| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3676 |
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| Symbol | |
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| ID | 5318783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 115816 |
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| End bp | 116439 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775489 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001312422 |
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| Protein GI | 150375826 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.508637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00105541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCCGACA AAGGCCGCCC CAGAAGTTTC GATCGTGCCG ACGCGCTTAT GCGCGCCATG
CAGGTTTTTT GGGAGAAGGG TTTTGAGGGC GCCTCGCTGA CAGCGCTGAC CGCGGCCATG
GGTATCAATG CGCCCAGCCT CTACGCCGCA TTTGGCTGCA AGGAGGCGCT CTACCTCGAG
GCAATGGAAC TCTATGCGCA AACGGTCGGC ACCGAAATTT GGCAACCGAT GGAAACAGCA
CCGACCGCAA GGGAGGCGTT CAGCCGTTTC CTCGCCGCGA CAGCCAAGGC CTATTCTCAG
CCGGATACCC CGCATGGCTG CCTGATAGCG CTTGGTGGAC TTCATCAGTC CGCAATACCG
AAAGCGGTCT GCGATGCGCT GTCCCGGCAC CGCACGGAGA ACGTCGATAA ACTGCGTCAA
CGTCTGGAGG CCGCGATCGC GGAAGGTGAA CTGCCCGACA GCCTGGACCC CGAGGCTGTC
GCCACCTTTT ATGCCACGGT ACAGCACGGA ATGTCGATTC TTGCGCGGGA TGGCGGCAGT
TATCAAACGC TGAAAAACGT CGCGGACGGA GCAATGGCCG CTTGGGGTAT GTTGACGCGG
GAGGACAGCG TCCGGCGCCC ATAA
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| Protein sequence | MPDKGRPRSF DRADALMRAM QVFWEKGFEG ASLTALTAAM GINAPSLYAA FGCKEALYLE
AMELYAQTVG TEIWQPMETA PTAREAFSRF LAATAKAYSQ PDTPHGCLIA LGGLHQSAIP
KAVCDALSRH RTENVDKLRQ RLEAAIAEGE LPDSLDPEAV ATFYATVQHG MSILARDGGS
YQTLKNVADG AMAAWGMLTR EDSVRRP
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