| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3664 |
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| Symbol | |
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| ID | 5318678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 102106 |
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| End bp | 104181 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775477 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001312410 |
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| Protein GI | 150375814 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00438442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGAGCG AGGACAGAGA AAGGTCCGGT GGAACTGTTG CCGGCGTGGA TGTCGGTGGA
ACGTTTACGG ATCTCATCAT CGTCGATGAG AGCACCGGCG CCGTCCAGAT CGGCAAAGTT
CCCACCACCA CGCACGATCA GTCGCACGGC GTCCTTTCGG CCCTTGCGAA ATCGAGCCGT
CCCATCGCCT CGATCGACCT GATCATCCAC GGTACGACGG CCACCACGAA TGCGCTTCTG
GAGCGCCGCA TTGCGCGCGC GGGCATGATT ACCACCAAGG GATTCCGGGA TGTGATCGAG
CTTGGCCGGC GAACGCGGCC GAGCCCTTAC GGACTCTTCG GAACCTTCGT GCCGGTCATC
CCCCGTAACC TCCGGCTCGA AGTCGACGAG CGCATTCAGG CAACGGGAGA GGTTGTGACG
CCGCTCGATG CCACAGGTGT GCGATCAGCC GTGCGGCAGC TGATCGAGGC CGGCTGCGAG
GCGCTGGTTA TCCATTTCCT GCATTCCTAC AAAAACCCCG CGCATGAACT CGAAGCGGCC
GAAATAGCCC GCGAATTCTG GCCGAACGCC TATATCACCA CCGGCCATTC CCTGCTTTCC
GAGGCGCGCG AATTCGAGCG TGGCGTTACA GCTTCCGTCA ATGCATCGGT GCAGCCGATC
CTGGAACGCT ACGTGGAGCG CCTGCGGGTC GAACTGGAAA AGAGCGGCTA CAGCCGTGAC
TACCTGATCA TGAACGGAAA CGGCGGAACG ATCTCATCAC GGCTGGCGTC CCGAGAAGCG
GCAAAAACCG TCATGTCCGG ACCGGCATCG GGCGTCATCG CGGCCGCCTA CACCGCCGCG
AAAGCCGGAT ACGACAACCT CATCACCTAC GACATGGGCG GAACCTCCAC GGACGTGGCG
CTGATCCGCG ACAACCGGCC TCTCGTCTCA AGCGAGATCG AAGTCGAATA TGCGATGCCC
ATCCACGTGC CGATGGTCGA TGTGCACACG GTCGGCGCAG GGGGCGGGTC GATCGCGCGC
GTTGATGAGG CCGGCCTGTT GCGGGTTGGC CCGCAGAGCG CGGGGTCAAC GCCGGGGCCG
ATCTGCTATG GCCGCGGCGG CGTCGAGCCA ACGATCTCGG ATGCGAATAT CGTGCTCGGC
AGGCTCAATT CCAAAAAGCT GCTGGCGGTG GATTCGCCTG TTCCGGTCGA GATGATCGCC
GGTGCATTTT CCGATCGTAT CGGCGGCCGC TTGAACCTCG ATGCCGCGCA TGCGGCGGAG
GCGACGGTTC GGATCGCGAA CATGAAAATG GCCGGTGCCA TCCGCATGGT TTCGATCGCA
AAGGGCAACG ATCCCCGTGA TTTCATCCTT TTCGCCTTCG GTGGCGCAGG GCCGCTCCAC
GCGGCTGCGA TTGCGCGTGA ACTGGGTATT CCGAGGGTTA TGATCCCGGC GCGCCCGGGC
ATCACCAATG CCATTGGCTG TATCGTCGCC GATCTGCGGC ATGACTATGT AAACACCGTC
AACATGCCGC TGCTGGACAG CGACCCTGCG CATTTGAACG CCATTCTGCA GCAGCAGACC
CGAGCCGGGA TGGACGCGAT CGAACTGGAG GCGGTGAGAC CGGAACGCAT CGAGGTCGAA
TACAGCGCCG ACATGCAGTT CGTCGGGCAA ACCCATCTGA TCAGGGTGCC TCTGCCGGAT
GCGGCGATCG ATCTGGACGA ACTGCAGGCG CGCTTCGAGG CCGCCTATTA CGATCGCTTC
CGTGTCCGCC TTCCGGAAGT CCGGGCGAAT ATCGTCAGCT TGAACTGTTC CGTTATCGGC
ATCCGCAAGG CGATCTCCCT CGACGATCTC ATTCCGAATG ACGGGCGCTG CGCGATACTG
AAGGAAGCCC AATTGGAAGT CCGACCGGTC TGGTTCGATG GTGCGTGGTG GGACACGCCG
GTCTATGCGC GCGAGCGTCT GCCGCTCCAG GCCGAGATCA AAGGGCCGGC CATCCTCGAG
CAGCTGGATG CCACCACGGT CATCAATCCG GGCGACGTGG CCAAAGGAGA TGTCCACGGG
AATATCATCA TCACCATCGG GGCACCCGCT GCATGA
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| Protein sequence | MWSEDRERSG GTVAGVDVGG TFTDLIIVDE STGAVQIGKV PTTTHDQSHG VLSALAKSSR
PIASIDLIIH GTTATTNALL ERRIARAGMI TTKGFRDVIE LGRRTRPSPY GLFGTFVPVI
PRNLRLEVDE RIQATGEVVT PLDATGVRSA VRQLIEAGCE ALVIHFLHSY KNPAHELEAA
EIAREFWPNA YITTGHSLLS EAREFERGVT ASVNASVQPI LERYVERLRV ELEKSGYSRD
YLIMNGNGGT ISSRLASREA AKTVMSGPAS GVIAAAYTAA KAGYDNLITY DMGGTSTDVA
LIRDNRPLVS SEIEVEYAMP IHVPMVDVHT VGAGGGSIAR VDEAGLLRVG PQSAGSTPGP
ICYGRGGVEP TISDANIVLG RLNSKKLLAV DSPVPVEMIA GAFSDRIGGR LNLDAAHAAE
ATVRIANMKM AGAIRMVSIA KGNDPRDFIL FAFGGAGPLH AAAIARELGI PRVMIPARPG
ITNAIGCIVA DLRHDYVNTV NMPLLDSDPA HLNAILQQQT RAGMDAIELE AVRPERIEVE
YSADMQFVGQ THLIRVPLPD AAIDLDELQA RFEAAYYDRF RVRLPEVRAN IVSLNCSVIG
IRKAISLDDL IPNDGRCAIL KEAQLEVRPV WFDGAWWDTP VYARERLPLQ AEIKGPAILE
QLDATTVINP GDVAKGDVHG NIIITIGAPA A
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