Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3661 |
Symbol | |
ID | 5318675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 98966 |
End bp | 99484 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775474 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001312407 |
Protein GI | 150375811 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.185456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0917972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAGC TGCACCACAT GAACAGAAAA AAGGAACAGG CAAGCCCCGG AGAAGAGCTT TCTCCCCGTC TCTCGCAAAC CGAGATCGAC AAGCGGCTGG TCGAGATCGG CTACAGGCTC GAAGCTCACA ACGCCCATCT GATCCGGTTG GCGCACCAAA GGGCGACGTC GCTGTTCCAG AAGGCCTTCG AGAACTACAC GATCACGCCG ACGCAGGTGG CGATCCTCGC GACGCTGCTT CGGCACGGCG ACCTGTCGCA GATCAACCTC GGCCGGCTGA CCGCCATCGA CACGGCCACC CTGAGCGCCA TGATGCGCCG CCTGCAGGAT AACGGCTTCA TCGAGCGAAT CCCATCAGAA CAGGATCAGC GCGTCAATCT GGTGCGTCTG ACAGCGAGAG GCATAGAGTT CACATTGGAA GTCCTGCCGA TCTCTCAGAA AGTCAGCGAC GAGGTCCTCG CTCCCCTCAA ACCGCGCGAC CGCGAACGTT TCATCGAAAT GCTCAAGCTA CTGGGCTGA
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Protein sequence | MRKLHHMNRK KEQASPGEEL SPRLSQTEID KRLVEIGYRL EAHNAHLIRL AHQRATSLFQ KAFENYTITP TQVAILATLL RHGDLSQINL GRLTAIDTAT LSAMMRRLQD NGFIERIPSE QDQRVNLVRL TARGIEFTLE VLPISQKVSD EVLAPLKPRD RERFIEMLKL LG
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