Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3659 |
Symbol | |
ID | 5318673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 97334 |
End bp | 98275 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775472 |
Product | inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_001312405 |
Protein GI | 150375809 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.121445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.165929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAAA CCGTGAAGAC GATACCCGTA TTGATGGATT GCGATCCGGG CCACGACGAC GCGATCGCGC TGGTCATGGC GCATCGCTCG CCGGTCATCG ACCTTCTGGG CGTGACCACG GTCTGCGGCA ACGCGCCGCC CGAACGCACG ACCAGCAATG CCCTGCGTAT CATGCAGTTC ATCGACGCAA CCGACGTGCC GGTCGCGCAG GGCTGCGTCA CACCCTTGGC GCGTCCGCTC GTGCTCGGTA CCGCGGACGG CCCGACGGGG CTCGACGGCA CCACATATCT GCCCGAGGCC ACCATGCCGC TGGTGCCGAT GCATGGCGTC GATTTCATCG CCAAGATTTT GCGCGAGGCG CCGGAGCCGG TCGTGCTCGT GCCGACCGGA CCGTTGACGA ACATCGCCAT GTTTTTGCTC AAATATCCCG AGCTGAAGCA CAAGATCGAC AAGATCGTGC TGATGGGCGG CGCCTTCTAT CGGCGAACCG AATATATCAC GCCGACCGAG TTCAATATCT TCTGCGACCC CGAAGCCGCC CGCATCGTGC TCGACAGCGG TCTAGACATT ATCATGGTGG GGCTCGACGT CACCATGCAT GTGCTCGTCG AGGAGGAGCA GTTCGCCGAG TTGCGCAAGA TCGAGAGCCC CTTGGGCAAA GTGGTGCTCG ACTGGCTGAA GTTCTACGAA AAGCTGCATC GTGGGCAGAT GGGCGTGGGC GGCGCGCTTC ATGATCCGCT GGCGCTTGCA GCCGTCATCG ATCCGACTCT CATCGAGACG CGGGAGGCGC ATGTCGAAAT CGACCTGACC GGAACTTATA CGTTCGGTGC CACCGTTGCC GACTTCTGGA ACGAGCGCAA GCTTGGCAAC AATACCCGCA TTGCCACCCG GGTCGATTCC GGGCGCTTCT TCGAGTTGAT GTATAGTCTG CTCCGGGATT GA
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Protein sequence | MSKTVKTIPV LMDCDPGHDD AIALVMAHRS PVIDLLGVTT VCGNAPPERT TSNALRIMQF IDATDVPVAQ GCVTPLARPL VLGTADGPTG LDGTTYLPEA TMPLVPMHGV DFIAKILREA PEPVVLVPTG PLTNIAMFLL KYPELKHKID KIVLMGGAFY RRTEYITPTE FNIFCDPEAA RIVLDSGLDI IMVGLDVTMH VLVEEEQFAE LRKIESPLGK VVLDWLKFYE KLHRGQMGVG GALHDPLALA AVIDPTLIET REAHVEIDLT GTYTFGATVA DFWNERKLGN NTRIATRVDS GRFFELMYSL LRD
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