Gene Smed_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3659 
Symbol 
ID5318673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp97334 
End bp98275 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content61% 
IMG OID640775472 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001312405 
Protein GI150375809 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.165929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAA CCGTGAAGAC GATACCCGTA TTGATGGATT GCGATCCGGG CCACGACGAC 
GCGATCGCGC TGGTCATGGC GCATCGCTCG CCGGTCATCG ACCTTCTGGG CGTGACCACG
GTCTGCGGCA ACGCGCCGCC CGAACGCACG ACCAGCAATG CCCTGCGTAT CATGCAGTTC
ATCGACGCAA CCGACGTGCC GGTCGCGCAG GGCTGCGTCA CACCCTTGGC GCGTCCGCTC
GTGCTCGGTA CCGCGGACGG CCCGACGGGG CTCGACGGCA CCACATATCT GCCCGAGGCC
ACCATGCCGC TGGTGCCGAT GCATGGCGTC GATTTCATCG CCAAGATTTT GCGCGAGGCG
CCGGAGCCGG TCGTGCTCGT GCCGACCGGA CCGTTGACGA ACATCGCCAT GTTTTTGCTC
AAATATCCCG AGCTGAAGCA CAAGATCGAC AAGATCGTGC TGATGGGCGG CGCCTTCTAT
CGGCGAACCG AATATATCAC GCCGACCGAG TTCAATATCT TCTGCGACCC CGAAGCCGCC
CGCATCGTGC TCGACAGCGG TCTAGACATT ATCATGGTGG GGCTCGACGT CACCATGCAT
GTGCTCGTCG AGGAGGAGCA GTTCGCCGAG TTGCGCAAGA TCGAGAGCCC CTTGGGCAAA
GTGGTGCTCG ACTGGCTGAA GTTCTACGAA AAGCTGCATC GTGGGCAGAT GGGCGTGGGC
GGCGCGCTTC ATGATCCGCT GGCGCTTGCA GCCGTCATCG ATCCGACTCT CATCGAGACG
CGGGAGGCGC ATGTCGAAAT CGACCTGACC GGAACTTATA CGTTCGGTGC CACCGTTGCC
GACTTCTGGA ACGAGCGCAA GCTTGGCAAC AATACCCGCA TTGCCACCCG GGTCGATTCC
GGGCGCTTCT TCGAGTTGAT GTATAGTCTG CTCCGGGATT GA
 
Protein sequence
MSKTVKTIPV LMDCDPGHDD AIALVMAHRS PVIDLLGVTT VCGNAPPERT TSNALRIMQF 
IDATDVPVAQ GCVTPLARPL VLGTADGPTG LDGTTYLPEA TMPLVPMHGV DFIAKILREA
PEPVVLVPTG PLTNIAMFLL KYPELKHKID KIVLMGGAFY RRTEYITPTE FNIFCDPEAA
RIVLDSGLDI IMVGLDVTMH VLVEEEQFAE LRKIESPLGK VVLDWLKFYE KLHRGQMGVG
GALHDPLALA AVIDPTLIET REAHVEIDLT GTYTFGATVA DFWNERKLGN NTRIATRVDS
GRFFELMYSL LRD