Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3658 |
Symbol | |
ID | 5318672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 96333 |
End bp | 97337 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775471 |
Product | inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_001312404 |
Protein GI | 150375808 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.438551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.106477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGGA TCATTCTCGA TGTGGATTCG GCCGGGGACG ATATCCTCGC CATCCTGTTT TCCGCCGGCT GCGCGGACAC CAAACTCGAA GGCGTTACCA CGGTCGCGGG GGCTGCCGGC GGCATTGAAC AGGTAACCAA CGTCGTGCTC AACACGCTGA CACTCGCCGG GCGGAACGAT ATCCCCGTTG CGGCCGGTGC CTACCGCCCG ATCGTGGGCA ATGCCAAGGC GGACATGGAA GCGCCTGTGC ATTTCGAAAA GCAGTTGCAG GCGCGTTTCG GCGACCGACT CCAGGGTTTC AACCCACCCG CCCCTGAACC CGCGTGCAAG GCAATGGGCA AGCATGCCAT CGATTTCATC GTCGACACCG TACGGGCCAA TCCCGGTGAA GTTTCCATCG TGGCGACAGG TCCGCAGACC AATGTCGCCC TGGCGCTGCA GATGGCGCCC GACATCGCCC GGCTGGTGAA GCAGATCGTC GTTCTCGGCG GCTGCTTTCA AACGCCAGGC AACATGACGC CGGTTTCCGA GTACAACATC TGGGCCGATC CTGAAGCGGC CCGGGTCGTG CTGCGATCCG GGGCACCGGT CATCCTGGTG CCCCTCGATG TGTGCGAGGA CAACCGCGTG GCGGCCTCGA TGCTGACGCG CGACGACCTC AACGATCTCG CAAGCCTTTA TCCTGCCAGC AAGGCGGTCT CCTATGTCTG CGAGACCTTC CCGATCTACA TCGATATCTG GCGCGAGTTC TTCGAACTCG TAGGCTTTCC GCTCGATGAT GCGATTGCCG TCGTCGCCGT TCTGCACCCC GAATTTTTCG AGATGACGGA GCCGCTCTTC GTCGACGTCG CCCTGAGCGA GCGCCTCGTG CGCGGCCAGA CCGTTGCATT CCAGGGACGC CAGATCCTGC CCTTCTCCGG CCCGAAGACG ACCCGGGTCT GCCGCAATCT CGACGGCAGG AAGTTCCTGT CCCTGTTCAA GAATTCCATT GGGAGCCTGT CGTGA
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Protein sequence | MERIILDVDS AGDDILAILF SAGCADTKLE GVTTVAGAAG GIEQVTNVVL NTLTLAGRND IPVAAGAYRP IVGNAKADME APVHFEKQLQ ARFGDRLQGF NPPAPEPACK AMGKHAIDFI VDTVRANPGE VSIVATGPQT NVALALQMAP DIARLVKQIV VLGGCFQTPG NMTPVSEYNI WADPEAARVV LRSGAPVILV PLDVCEDNRV AASMLTRDDL NDLASLYPAS KAVSYVCETF PIYIDIWREF FELVGFPLDD AIAVVAVLHP EFFEMTEPLF VDVALSERLV RGQTVAFQGR QILPFSGPKT TRVCRNLDGR KFLSLFKNSI GSLS
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