Gene Smed_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3658 
Symbol 
ID5318672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp96333 
End bp97337 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID640775471 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001312404 
Protein GI150375808 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.438551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.106477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA TCATTCTCGA TGTGGATTCG GCCGGGGACG ATATCCTCGC CATCCTGTTT 
TCCGCCGGCT GCGCGGACAC CAAACTCGAA GGCGTTACCA CGGTCGCGGG GGCTGCCGGC
GGCATTGAAC AGGTAACCAA CGTCGTGCTC AACACGCTGA CACTCGCCGG GCGGAACGAT
ATCCCCGTTG CGGCCGGTGC CTACCGCCCG ATCGTGGGCA ATGCCAAGGC GGACATGGAA
GCGCCTGTGC ATTTCGAAAA GCAGTTGCAG GCGCGTTTCG GCGACCGACT CCAGGGTTTC
AACCCACCCG CCCCTGAACC CGCGTGCAAG GCAATGGGCA AGCATGCCAT CGATTTCATC
GTCGACACCG TACGGGCCAA TCCCGGTGAA GTTTCCATCG TGGCGACAGG TCCGCAGACC
AATGTCGCCC TGGCGCTGCA GATGGCGCCC GACATCGCCC GGCTGGTGAA GCAGATCGTC
GTTCTCGGCG GCTGCTTTCA AACGCCAGGC AACATGACGC CGGTTTCCGA GTACAACATC
TGGGCCGATC CTGAAGCGGC CCGGGTCGTG CTGCGATCCG GGGCACCGGT CATCCTGGTG
CCCCTCGATG TGTGCGAGGA CAACCGCGTG GCGGCCTCGA TGCTGACGCG CGACGACCTC
AACGATCTCG CAAGCCTTTA TCCTGCCAGC AAGGCGGTCT CCTATGTCTG CGAGACCTTC
CCGATCTACA TCGATATCTG GCGCGAGTTC TTCGAACTCG TAGGCTTTCC GCTCGATGAT
GCGATTGCCG TCGTCGCCGT TCTGCACCCC GAATTTTTCG AGATGACGGA GCCGCTCTTC
GTCGACGTCG CCCTGAGCGA GCGCCTCGTG CGCGGCCAGA CCGTTGCATT CCAGGGACGC
CAGATCCTGC CCTTCTCCGG CCCGAAGACG ACCCGGGTCT GCCGCAATCT CGACGGCAGG
AAGTTCCTGT CCCTGTTCAA GAATTCCATT GGGAGCCTGT CGTGA
 
Protein sequence
MERIILDVDS AGDDILAILF SAGCADTKLE GVTTVAGAAG GIEQVTNVVL NTLTLAGRND 
IPVAAGAYRP IVGNAKADME APVHFEKQLQ ARFGDRLQGF NPPAPEPACK AMGKHAIDFI
VDTVRANPGE VSIVATGPQT NVALALQMAP DIARLVKQIV VLGGCFQTPG NMTPVSEYNI
WADPEAARVV LRSGAPVILV PLDVCEDNRV AASMLTRDDL NDLASLYPAS KAVSYVCETF
PIYIDIWREF FELVGFPLDD AIAVVAVLHP EFFEMTEPLF VDVALSERLV RGQTVAFQGR
QILPFSGPKT TRVCRNLDGR KFLSLFKNSI GSLS