Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3655 |
Symbol | |
ID | 5318669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 92760 |
End bp | 94289 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775468 |
Product | ABC transporter related |
Protein accession | YP_001312401 |
Protein GI | 150375805 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.238424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACG CGATCGAAAT GCAGGCCATC ACCAAGCGCT TCGGCACGCT GGCCGCCAAC AAAGACGTGA CGTTCAGCGT GCGCAGGGGC GAAATCCACG CGCTCGTCGG CGAGAACGGC GCCGGTAAGA CGACGTTGAT GAACGTGCTG TTCGGACTGC ACCAGCCCGA CGAGGGCGTT CTGGCCATCA ACGGCCGGAC CGTTAAGATG GATTCGCCAC GCACTGCCAT CGCGCTCGGT CTCGGCATGG TGCATCAGCA TTTCAAGCTC GTCCCCTCGC TGACCGTCGC CGAGAACATC TTCCTCGGCA TGGAAATGAC CCGAAACGGG CTTATCGATC GCAAGGCCCA GTCGGCAAAG GTCGCGGAGC TTTCCAGCGC CTTCGGCCTG CATGTAGACC CGGAGCGCCG CGTGATGGAT CTGTCTGTCG GGATCGAGCA GCGCGTCGAG ATTCTGAAGG TCCTCGTTCG CGGTGCCGAA ATCATCATTC TCGACGAGCC GACCGCCGTC CTGACGCCGC AGGAAAGCCG CGACCTCTTT CGAATTTTGC GATCCTTCAC GGAGAAGGGC ATGACGGTGG TGTTCATTTC GCACCATCTC ACCGAGGTAA TGGAAGTTTC CGACACCGTG ACCGTGTTGC GCGACGGTCA GGTCGTCGGA ACGAAACCGA CGCGTGAACT GACGGAAGAC GAACTGGTCC GCATGATGGT CGGCCGCGAC GTCAGCTTTG CCCGTCGCGA ACGGCAGCCG GCAAATGGCG GGACGGTTTT GAATCTAAGC GAAGTCTGCG CCCGCGACGA CCGCGGCCTC CCCACCTTGC GCGATGTCAG CGTCGAGGTT CGCGCAGGCG AAATTGTCGG CGTCGTCGGT GTCGACGGCA ACGGCCAGAC GGAACTCGCC GAGGTAATTT CGGGACTGCG TCCGGTGAGC TATGGCACGA TATCGCTCGC TGGCACCGCG CTTGAAAACG CCGACCCACT GACAATCCGC AAGTCAGGAC TTTCGCATGT GCCCGGCAAC CGGCTTGCGC GTGGCGTCGA TGCGTCGGCA TCCATCGCCT CCAACATTCT GATGGGCCGC CATCAAACGG CTCCTTGGGT ACGCCGCGGC ATTGTCCGCT GGTCCTATGT ACGCGAACAG GCGGGCAAGC TGATCCGCCA GTTCGAGATC CGCGCGTCCA GCGAGCGTGC TCTCGTGAAG ACGCTATCGG GCGGCAATAT GCAGAAGGTG GTGCTCGCCC GGGAATTTTC GCAGAACATG CCCTTCCTCC TGATCGACCA GCCGACCCGC GGTGTCGATA TCGGTGCGAT GGAGGGCATT CACGACGAGA TCATGCGGCA GCGCAATTCC GGCGCCGCAA TCCTGCTGAT CTCCGTGCAG CTGGACGAAA TCCTCAAGCT TGCGGATCGG ATTCTCGTCA TGTTCGGGGG ACGCATCGTC GGCGAGGTGG ATCCGGAAAG CACGACCGAG GACGAAATCG GTTTCCTTAT GGCCGGCCGC GCATCGAGCG AGGCGAAAGT GGCATCATGA
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Protein sequence | MTYAIEMQAI TKRFGTLAAN KDVTFSVRRG EIHALVGENG AGKTTLMNVL FGLHQPDEGV LAINGRTVKM DSPRTAIALG LGMVHQHFKL VPSLTVAENI FLGMEMTRNG LIDRKAQSAK VAELSSAFGL HVDPERRVMD LSVGIEQRVE ILKVLVRGAE IIILDEPTAV LTPQESRDLF RILRSFTEKG MTVVFISHHL TEVMEVSDTV TVLRDGQVVG TKPTRELTED ELVRMMVGRD VSFARRERQP ANGGTVLNLS EVCARDDRGL PTLRDVSVEV RAGEIVGVVG VDGNGQTELA EVISGLRPVS YGTISLAGTA LENADPLTIR KSGLSHVPGN RLARGVDASA SIASNILMGR HQTAPWVRRG IVRWSYVREQ AGKLIRQFEI RASSERALVK TLSGGNMQKV VLAREFSQNM PFLLIDQPTR GVDIGAMEGI HDEIMRQRNS GAAILLISVQ LDEILKLADR ILVMFGGRIV GEVDPESTTE DEIGFLMAGR ASSEAKVAS
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