Gene Smed_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3649 
Symbol 
ID5318396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp86646 
End bp86996 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content62% 
IMG OID640775462 
Productmembrane protein-like protein 
Protein accessionYP_001312395 
Protein GI150375799 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.593494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGGCC TGCTGATCTC GGGCTATTCA CCAGGGTTGC TCATCGCGGT CGCGAGCCTC 
GGCAACGTGC TTGCTTCGGT CATGAATTGG GGACTGGGCC GGGGCATCGA GCATTTTCGG
GACAGGCGCT GGTTTCCGGT GCGCGACGCC GGGTTGGAGC GTGCGCAGCA CTGGTATCGC
CGTTATGGAA AGTGGTCGCT GCTCCTTAGT TGGGTGCCTG TTGTCGGCGA CCCCTTGACT
GTGGTGGCGG GCATAATGAA GGAGCCGCTG TTGCCGTTTC TGTTGCTGGT GGCGATCGCC
AAGTCGGCAC GTCATCTGGT CGTGGGACCG GTTACCTTGA ACTGGGCATA G
 
Protein sequence
MAGLLISGYS PGLLIAVASL GNVLASVMNW GLGRGIEHFR DRRWFPVRDA GLERAQHWYR 
RYGKWSLLLS WVPVVGDPLT VVAGIMKEPL LPFLLLVAIA KSARHLVVGP VTLNWA