| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3645 |
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| Symbol | |
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| ID | 5318187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 81422 |
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| End bp | 83221 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775458 |
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| Product | ABC transporter related |
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| Protein accession | YP_001312391 |
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| Protein GI | 150375795 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TTGCTGCAGC GCCCGCTCCG CAGGCCGGAT CGGCACGGAT CACCTCGTGG
CGCCTGTTGG TCAACAATCG GTTGGCGACG GCGGGACTCG TGCTCCTTGG AACGATCCTG
TTGCTGACGG CCCTCGCGCC AATCCTGCCG CTTCCCGATC CGAATGCCAC GGCACCAGCC
GACCGGCTGA AACCAGTGCT GACCGCCGGA CACCTCCTCG GCACGGATCA GCTCGGCCGG
GATATATTGA GCCGCCTGCT TTGGGGCACC CGGGTTTCGG TCGCCGTCGG TTTCGCCGCG
ACATTCATCG CTGCCGGCAT CGGATCGGCG ATCGGCATCG TTGCGGGCTA TGCCGGTGGG
CGCATCGACA ACGCGATGAT GCGCGGCATC GACATGCTGA TGGCCTTCCC CTACATCCTG
CTGGCGTTGG CGATCGTCGC CGCCCTCGGG CCGGGGCTGA TGAACGCGCT TTATGCGATC
GCCCTCGTAA ACATCCCGTT CTTTGCCCGC AATGTGCGCG GCGTGACGCT CGGCTACGCC
CATCGCGAAT TCGTCGACGC GGCACGGCTC TCCGGCAAGG GACATCTGTC GATCATTCTC
ACCGAAGTTC TGCCGAATGT GATGCCTGTC ATCGTCATCA CGATGTCGAC GACGGCGGGC
TGGATGATCC TCGAGACGGC CGGTCTCAGC TTCCTCGGCC TCGGTGCGCA GCCGCCCCAG
GCCGATCTCG GCTCCATGCT GGGTGAGGGG CGCGCGCAAA TCTTTACTGC GCCGCATGTT
TCGATCGTGC CGGGCGTCAT GATCTTCCTG ATCGTCATCA GCCTGAACGT TCTCGGCGAC
GGAATTCGCG ATGTGCTGGA CCCGCGCCTT CGCTCGGGCG CACTCGCGCG CCCGGGGCCG
GTCACCGAAG TGGCGCGCGA TCGCACGGCG CCGGCAAGCA CGGCTGACGA TGCCGTGCTC
GTAATCGAGA AACTGGAAAC AGGGTTTCGG CAGGGAGGGG AGTTCATACC GGCGGTTCGA
GGCGTCTCGC TGCACGTGAA GCCGGGCAAA TGCCTCGGAC TTATCGGCGA GAGCGGCTCG
GGCAAAAGCG TAACCGCCTT GTCCGTCATG GGGCTCGTCG CCTCGCCGCC AGGTGTGATC
CGCAACGGCG CCGTCTACGT TGGGAACGAG GATGTTCTTT CCATGCCCGA GACCAGGCTG
ATCGCAAAGC GTGGCAGCCG TGTCGCCTAT GTGTTCCAGG ACCCGCTCAC GACATTGCAT
CCGATGGTTG CGATCGGGCG GCAGGTGGAG GAATCGATAG CCGCGCATCA GTCGATCAGC
GCGGCCGATT GCCGCAAAAA GGCAATTGAA CTGCTGGAAA AGGTGGGCAT TCCGGACGCG
CGGGCGCGGT CGGTCCACTA TCCCCACCAG CTCTCCGGCG GACAGCGTCA ACGTGTCGGA
ATTGCGATGG CGCTCGCCAA CGATCCGGAA ATTATCATAG CGGATGAGCC GACGACTGCG
CTGGACGTGA CCGTGCAGGC CCGCATTCTG GAGCTCCTGC GCGATCTTCA GAGAGAGCGG
GGCATGGCGC TTCTCTTCAT CACCCACGAT TTCGGGATCG TCTCCGAGTT TTGCGATCGC
GTGGCCGTCA TGAAGGATGG CGAAATTGTC GAAACGGGGG AAACCCGGCA AGTTCTCGCC
GATCCGCAGC ATGCCTATAC GAAGCGTCTG ATCGCCTGCG TGCCCGAGCT CGGGACGGGC
GCGCGCTTCC TAGATCGTGT TGCAACGCTT TTTGCCGAAG ACAAGAAGGA GGTGGCGTGA
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| Protein sequence | MSTLAAAPAP QAGSARITSW RLLVNNRLAT AGLVLLGTIL LLTALAPILP LPDPNATAPA
DRLKPVLTAG HLLGTDQLGR DILSRLLWGT RVSVAVGFAA TFIAAGIGSA IGIVAGYAGG
RIDNAMMRGI DMLMAFPYIL LALAIVAALG PGLMNALYAI ALVNIPFFAR NVRGVTLGYA
HREFVDAARL SGKGHLSIIL TEVLPNVMPV IVITMSTTAG WMILETAGLS FLGLGAQPPQ
ADLGSMLGEG RAQIFTAPHV SIVPGVMIFL IVISLNVLGD GIRDVLDPRL RSGALARPGP
VTEVARDRTA PASTADDAVL VIEKLETGFR QGGEFIPAVR GVSLHVKPGK CLGLIGESGS
GKSVTALSVM GLVASPPGVI RNGAVYVGNE DVLSMPETRL IAKRGSRVAY VFQDPLTTLH
PMVAIGRQVE ESIAAHQSIS AADCRKKAIE LLEKVGIPDA RARSVHYPHQ LSGGQRQRVG
IAMALANDPE IIIADEPTTA LDVTVQARIL ELLRDLQRER GMALLFITHD FGIVSEFCDR
VAVMKDGEIV ETGETRQVLA DPQHAYTKRL IACVPELGTG ARFLDRVATL FAEDKKEVA
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