Gene Smed_3635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3635 
Symbol 
ID5318321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp69334 
End bp70182 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID640775448 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001312381 
Protein GI150375785 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGTT TTGGCGTCCA TACGAGCATG TGGACAATGA ACTGGGACCG CCCCGGAGCT 
GAGAGGGCGG TAGTGGCCGC TGTCAAATAC AAGGTCGATT TCATCGAAAT TCCCATGCTC
AATCCGCCTG CCGTCGATAC GGAACATACC CGTGCCCTGC TGGAGAAGCA TCGTCTGCGC
GCGGTCTGCT CGCTGGGCCT GCCGGAACCG GCCTGGGCCT CGGTGCGTCC CGACGCGGCG
ATCGACCATC TGAAGATCGC GATCGACAAG ACGGCGGATC TCGGTGGGGA AGCGCTGTCC
GGCGTGATCT ATGGCGGTAT CGGCGAGCGC ACGGGCGTGC CGCCGACGGT CGAGGAATAC
GACAACATCG CCCGCGTGCT GCAGGCCGCG GCCAAACACG CCAAGTCACG CGGCATCGAG
CTTGGTGTCG AAGCCGTCAA TCGTTACGAG AACCACCTGA TCAATACCGG CTGGCAGGCG
GTTAAGATGA TAGAGCGGGT TGGAGCCGAT AACGTGTTCG TGCACCTCGA CACATATCAC
ATGAACATTG AGGAAAAAGG CATCGGCAAG GGCATCCTCG ATGCCCGCGA ACATCTGAAA
TACATCCATC TTTCCGAAAG CGACCGCGGC ACGCCGGGCT ACGGCACCTG CGGCTGGGAC
GAGATTTTTT CGACCCTTGC GGCGATCGGC TTCAAGGGCG GCCTTGCTAT GGAAAGCTTC
ATCAACATGC CGCCGGAAGT CGCCTATGGT CTCGCCGTCT GGCGCCCCGT CGCGAAGGAC
GAGGAAGAGG TGATGGGCAA CGGCCTGCCG TTCCTGCGCA ACAAGGCTAC GCAATACGGC
CTGATTTGA
 
Protein sequence
MQGFGVHTSM WTMNWDRPGA ERAVVAAVKY KVDFIEIPML NPPAVDTEHT RALLEKHRLR 
AVCSLGLPEP AWASVRPDAA IDHLKIAIDK TADLGGEALS GVIYGGIGER TGVPPTVEEY
DNIARVLQAA AKHAKSRGIE LGVEAVNRYE NHLINTGWQA VKMIERVGAD NVFVHLDTYH
MNIEEKGIGK GILDAREHLK YIHLSESDRG TPGYGTCGWD EIFSTLAAIG FKGGLAMESF
INMPPEVAYG LAVWRPVAKD EEEVMGNGLP FLRNKATQYG LI