Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3635 |
Symbol | |
ID | 5318321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 69334 |
End bp | 70182 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775448 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001312381 |
Protein GI | 150375785 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGGTT TTGGCGTCCA TACGAGCATG TGGACAATGA ACTGGGACCG CCCCGGAGCT GAGAGGGCGG TAGTGGCCGC TGTCAAATAC AAGGTCGATT TCATCGAAAT TCCCATGCTC AATCCGCCTG CCGTCGATAC GGAACATACC CGTGCCCTGC TGGAGAAGCA TCGTCTGCGC GCGGTCTGCT CGCTGGGCCT GCCGGAACCG GCCTGGGCCT CGGTGCGTCC CGACGCGGCG ATCGACCATC TGAAGATCGC GATCGACAAG ACGGCGGATC TCGGTGGGGA AGCGCTGTCC GGCGTGATCT ATGGCGGTAT CGGCGAGCGC ACGGGCGTGC CGCCGACGGT CGAGGAATAC GACAACATCG CCCGCGTGCT GCAGGCCGCG GCCAAACACG CCAAGTCACG CGGCATCGAG CTTGGTGTCG AAGCCGTCAA TCGTTACGAG AACCACCTGA TCAATACCGG CTGGCAGGCG GTTAAGATGA TAGAGCGGGT TGGAGCCGAT AACGTGTTCG TGCACCTCGA CACATATCAC ATGAACATTG AGGAAAAAGG CATCGGCAAG GGCATCCTCG ATGCCCGCGA ACATCTGAAA TACATCCATC TTTCCGAAAG CGACCGCGGC ACGCCGGGCT ACGGCACCTG CGGCTGGGAC GAGATTTTTT CGACCCTTGC GGCGATCGGC TTCAAGGGCG GCCTTGCTAT GGAAAGCTTC ATCAACATGC CGCCGGAAGT CGCCTATGGT CTCGCCGTCT GGCGCCCCGT CGCGAAGGAC GAGGAAGAGG TGATGGGCAA CGGCCTGCCG TTCCTGCGCA ACAAGGCTAC GCAATACGGC CTGATTTGA
|
Protein sequence | MQGFGVHTSM WTMNWDRPGA ERAVVAAVKY KVDFIEIPML NPPAVDTEHT RALLEKHRLR AVCSLGLPEP AWASVRPDAA IDHLKIAIDK TADLGGEALS GVIYGGIGER TGVPPTVEEY DNIARVLQAA AKHAKSRGIE LGVEAVNRYE NHLINTGWQA VKMIERVGAD NVFVHLDTYH MNIEEKGIGK GILDAREHLK YIHLSESDRG TPGYGTCGWD EIFSTLAAIG FKGGLAMESF INMPPEVAYG LAVWRPVAKD EEEVMGNGLP FLRNKATQYG LI
|
| |