Gene Smed_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3633 
Symbol 
ID5318319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp67110 
End bp67826 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID640775446 
ProductL-fuculose-phosphate aldolase 
Protein accessionYP_001312379 
Protein GI150375783 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CGGACAAGCT GGCACTTCGG CGAGAGATGG TGGACATCTG CCGGCGGATG 
AATTCGAGTG GCATCAACCA GGGTACGGCC GGCAATCTCT CGCTCCGGAC CGATGACGGC
TTCCTCATCA CGCCCTCATC CATGCCCTAT GAGACGATGC AACCGGAAGA CCTGGTGGAG
ATGGCCTTCG ACGGCACCTA TGTGGGCCAT CGGCCGTCAT CGGAATGGCG CTTCCATCGC
GACATTCTGC GCGCGCGCAC CGATATAGAC GTGGTCCTGC ATTGCCATTC GATCTATGCG
ACGACGCTTG CGTGCCACCA CAAGACCATC CCGAGCTTTC ACTACATGAC GGGAATTGCC
GGCGGCACGA CGATACGCTG CGCCGAATAC GCCACCTTCG GCACCCAGGC GCTCTCCGAC
AACGCGCTTG TCGCGCTCAA GGGCCGCCTG GCTTGCCTGC TCGGTCAACA CGGACAGATC
TCTCTCGGCA AGACGCTGGA ACAGGCCCTG TGGCTTGCGA TCGAAGTCGA GACACTGTCG
CGGATCTATG TCCAGGCCCT CACCCTTGGC GAGCCGCCCG TGCTGCCCGA CGACGAGATG
GAGCGCGTAA TCGCCCAGAT GCGACGCATG AGCTATGGCC AGGCGCCCGA CGCCGAAGGC
GTGAACGACG TAGCACGCCC GCGCGATGCC TTGGGCAATT CCGGCAAGAG TGTGTAG
 
Protein sequence
MAETDKLALR REMVDICRRM NSSGINQGTA GNLSLRTDDG FLITPSSMPY ETMQPEDLVE 
MAFDGTYVGH RPSSEWRFHR DILRARTDID VVLHCHSIYA TTLACHHKTI PSFHYMTGIA
GGTTIRCAEY ATFGTQALSD NALVALKGRL ACLLGQHGQI SLGKTLEQAL WLAIEVETLS
RIYVQALTLG EPPVLPDDEM ERVIAQMRRM SYGQAPDAEG VNDVARPRDA LGNSGKSV