Gene Smed_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3616 
Symbol 
ID5318627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp50315 
End bp50755 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID640775430 
Productsignal-transduction protein 
Protein accessionYP_001312363 
Protein GI150375767 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCT GCCAAATCCT GAGGAGCAAG TCTCCCGAAA TCTTCTCGGT CACGCCGGAC 
CACACGATGG TGGAAGTATT GCAGCTGTTT CGCGACAGGA ATATCGGCTT TGTCGTCGTC
GGCCGTTCGC CAGGGGAATG CTTGGGCACA CTCTCGGAGC GGGACTGCTG CTATGCCGTG
GCCGAGTACG GCTCCGAAGC ACCCCTCATG CGGGTGGGAG AAATCATGAA CCGCACTGTC
GCGACCTGCT CGACGGAGGA TTTCCTCCCG TTCGTAATGT CGATCATGAC GGAGCGGCGC
ACACGCCATG TATTGGTCAT GGACGGCAAC GATGCCGTCG GCGTGGTTAG CATCGGCGAC
GTGGTCAAAC ACCGGCTCGA AGAGGCATTG CAAGCGGAGC GGGACATGCA CGATTACATT
TGCGGAGCCA ACTATCGCTG A
 
Protein sequence
MHICQILRSK SPEIFSVTPD HTMVEVLQLF RDRNIGFVVV GRSPGECLGT LSERDCCYAV 
AEYGSEAPLM RVGEIMNRTV ATCSTEDFLP FVMSIMTERR TRHVLVMDGN DAVGVVSIGD
VVKHRLEEAL QAERDMHDYI CGANYR