| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3614 |
|---|
| Symbol | |
|---|
| ID | 5318625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 48651 |
|---|
| End bp | 49637 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640775428 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001312361 |
|---|
| Protein GI | 150375765 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG TCGTCGCTCT CGGTCTGATC GTCTTCAAGG TCGCGTTGCT GATCGCGATT
CTGTTGTTGC TACCCCTGCC GCTAACGTGG TTGGAACGTA AGATAGCGGG GCACATGCAG
CAGCGGATGG GGCCGATGCG CGTGGGCTGG CACGGTCTTC TGCAGCCGGT AGCGGACGGT
ATCAAGCTCC TGACCAAAGA GGACCACATA CCGGCCGAGG CCGACCGCTT CCTGTTTAAA
CTGGCTCCGA TCCTGGCGCT TGCCCCGCCC TTCGTGGTGT TTGCCGCAAT CCCCTTCGGC
GAAACTGTTT CGGTTCTTGG CAACGAGATC ACTCTCTACA TTTCCAACCT GAACGTAGCG
TTGCTTTTCG TCTTCGCGGT CATTGGGCTG GAGGTCTATG GCGTCATCTT CGGCGGCTGG
GCGGCTAACA GCAAATATGC GGTCCTCGGC TCTCTGCGGA CCTGCGCGCA GATGATCAGC
TACGAGATTC CGATGGGGTT CGCGGTCATC GGCGTCGTCA TGCTGGCGCA ATCCATGAGC
CTGCTGGACA TCGTGCGGGC GCAAAGCGAC GTCTGGAATG TCGTTTATCA GCCGATCGGA
TTTTTCGTGT TCTTCGTCGC AGGCCTTGCA GAAGCGCAGC GAATTCCTTT CGATCTTGCG
GAAGCCGAAG GCGATCTGGG AGCCGGGTTC CACACCGAAT ATAGCGGCAT CCGCTTCGCC
TTGTTCATGG TCAGCGAATA TGTCGTGATG GTGCTGGTGT CGGTCCTCAC TGTAATCCTG
TTCTTCGGCG GGTGGAACGG CGTGCTCATC CCACTGCCGC CGCTCCTCTG GTTCTTGCTG
AAGGTTGCCT TCTTCATCTA TCTGTTCATG TGGTTCCGCT TTACCTTCCC CCGCTACCGC
TATGACCAAC TGATGGCAAT CGGATGGAAG GTCTTGCTTC CCCTGTCTTT GGCGAACATA
ATCATCAGCG GTGTTGTTTT CTCCTGA
|
|---|
| Protein sequence | MELVVALGLI VFKVALLIAI LLLLPLPLTW LERKIAGHMQ QRMGPMRVGW HGLLQPVADG
IKLLTKEDHI PAEADRFLFK LAPILALAPP FVVFAAIPFG ETVSVLGNEI TLYISNLNVA
LLFVFAVIGL EVYGVIFGGW AANSKYAVLG SLRTCAQMIS YEIPMGFAVI GVVMLAQSMS
LLDIVRAQSD VWNVVYQPIG FFVFFVAGLA EAQRIPFDLA EAEGDLGAGF HTEYSGIRFA
LFMVSEYVVM VLVSVLTVIL FFGGWNGVLI PLPPLLWFLL KVAFFIYLFM WFRFTFPRYR
YDQLMAIGWK VLLPLSLANI IISGVVFS
|
|---|
| |