Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3613 |
Symbol | |
ID | 5318624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 46975 |
End bp | 47631 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640775427 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001312360 |
Protein GI | 150375764 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA CCCAGATTTC GCAACCTGTC ACGCCAGGCG AACCCGCTCC GGATTTTGTT TTACCCGCAG TGGACGGCAG CGGGACGATC TCCTTGGCCG ACTATCGTGG GAGGACCCCA CTTTTTCTTG CACTGTTCAT TGGCCTCTGG TGTCCATTCT GCCGCCGCGC AATTGCCCAG ATCGCAGCAT CAGAGTCTGC ACTTAAGTCT GCAGGAGTTG AAACGCTCGG AGTTGTGGCT ACAGCCCCAG ACAACGCCCA GCTTTATTTC CGATTCAGGC CCACACGCCT CCGTCTGGCG GCTGATCCGG AACTCTCGAC GCATCAAGCA TACGGCGTCC CAAGACCCAT ACCGACGCCG GAGTTCCTGA GGGCGCTGGA TACGACCCTG ATCAACCCAG ACGGCTTGTT CGCAGAACCG CTGCCGATCA CGCATGCGGC CGAGGCCATT GGAAAGCTAG ACAACTACAA GTATAATGAA ACGGATCAAG CCGATATGGA GCGGCAGTGG CCCCAGCTTA AGGGCCAATT TTTAATTGAT AGGGCCGGCT TCGTCCGCTG GGCCTACATT GAGTGCGCGG CCGATGGGCT AGCCGGGTTG GGGAAGTTTC CTTCAGCCAC CGAAGTCCTG GCCGCAGCCC GCGCGCTAGC CGACTAA
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Protein sequence | MSITQISQPV TPGEPAPDFV LPAVDGSGTI SLADYRGRTP LFLALFIGLW CPFCRRAIAQ IAASESALKS AGVETLGVVA TAPDNAQLYF RFRPTRLRLA ADPELSTHQA YGVPRPIPTP EFLRALDTTL INPDGLFAEP LPITHAAEAI GKLDNYKYNE TDQADMERQW PQLKGQFLID RAGFVRWAYI ECAADGLAGL GKFPSATEVL AAARALAD
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