| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3611 |
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| Symbol | |
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| ID | 5318622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 40960 |
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| End bp | 42564 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775425 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001312358 |
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| Protein GI | 150375762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC ATCCGAACGA AACATACGAT TTCATCGTCG TCGGCGCCGG CTCCGCTGGC
TGCGTTCTCG CAAACCGGCT TTCGGCCGAC CCGAGAAACC GGGTCCTGCT GCTCGAAGCA
GGCGGCAGTG ACCGCTACCA CTGGGTTCAT GTACCGATCG GCTATCTCTA CTGCATGGGC
AACCCGAGAA CCGACTGGAT GATGAGGACG GCTGCGGAGC CCGGTCTCAA CGGACGCAGC
CTGCCCTATC CGCGTGGCAA GCTGCTGGGC GGCTGCTCTT CCATCAACGG CATGATATAT
ATGCGCGGTC AGGCGGCCGA CTACGACGGC TGGCGCCAGG CCGGCAACGC CGGTTGGGGC
TGGGACGATG TGCTTCCCTA TTTCCTGAAA TCGGAGGATA ACCACCGCGG CACGTCGGCG
ATGCATGGCG CAGGCGGGGA ATGGCGCGTC GAGCGGCAAC GCCTGTCCTG GCCGATCCTC
GACGCCTTTC GCGATGCGGC GGAGGAGCTC GGCATTCCAA AGACGGAAGA TTTCAATATC
GGGGACAACG AGGGGTCCGG CTATTTCGAG GTGAACCAGC GTGGCGGCGT GCGCTGGAAC
ACGACGAAGG CCTTCCTGCG CCCCGCTATG AAGCGGCCGA ATCTCAAGGT ATTGACCGGC
GCAGAGACGG AGCGCCTGAT CTTCGAGGGC CGCAGGACAA AGGGCATCCG CTTCCGCTTG
CACGGACGGA TCCGGGAGGC GCGAGCGACC CGCGAGGTCA TTCTCTCTGC AGGCGCGATC
AACACGCCGA AAATCCTCGA GCTGTCCGGG GTGGGGCGAC CGGACGTCGT CTCGGCGGCC
GGTATAGAGC TGGTCCACGA TCTCCCGGGT GTCGGCGAAA ATCTGCAGGA TCATCTTCAG
ATCCGCACAG TTTTTCGCAT CGAAGGGGCA AAAACGCTGA ACCAGCTCTA TCACAGCGTC
TTTTCCCGTA TGGGAATGGG CCTCGAATAC ATGCTGAGAC GTTCCGGCCC ACTATCCATG
GCACCGAGTC AGCTCGGCAT ATTCGCCAGG AGCAGCCCGT CCGTCGCAAC CGCAGATCTC
GAATATCACG TGCAGCCGCT GAGCACCGAT CGGTTGGGTG AGCCGCTGCA CAAACACCCT
GCCGTCACCG TGTCGGTTTG CAATCTGAGG CCGGAGAGCC GGGGAAGTGT GCATGTCACG
ACAGGGGATG CCTCCGCCGC ACCCGATATC CGGCCGAACT ACCTGTCGAC GGCCGGTGAC
CGGCTCCTTG CGGCGCAGGC GATCCGTCAT GCCCGCAGCC TGATGGCGAC AAAGGCGATC
GCACGATTTA AGCCGGCAGA AATGCTGCCG GGCGCGGAGT TCCAAAGCGA GGATGAACTT
ATCCGCCGGG CCGGCGACAT CGCGACGACG ATCTTTCACC CGGTGGGCAC CTGCAAGATG
GGCAGCGATC CGATGGCGGT GGTGGACCCT TCGCTTAAGG TTCATGGTCT TGATGGCTTG
CGTGTCGTCG ACGCCTCGAT CATGCCCAGC ATCGTCTCCG GAAACACGAA CTCACCGGTA
ATCATGATTG CGGAAAAAGC GGCGGATGCC ATTCTCCGCC GCTAG
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| Protein sequence | MNPHPNETYD FIVVGAGSAG CVLANRLSAD PRNRVLLLEA GGSDRYHWVH VPIGYLYCMG
NPRTDWMMRT AAEPGLNGRS LPYPRGKLLG GCSSINGMIY MRGQAADYDG WRQAGNAGWG
WDDVLPYFLK SEDNHRGTSA MHGAGGEWRV ERQRLSWPIL DAFRDAAEEL GIPKTEDFNI
GDNEGSGYFE VNQRGGVRWN TTKAFLRPAM KRPNLKVLTG AETERLIFEG RRTKGIRFRL
HGRIREARAT REVILSAGAI NTPKILELSG VGRPDVVSAA GIELVHDLPG VGENLQDHLQ
IRTVFRIEGA KTLNQLYHSV FSRMGMGLEY MLRRSGPLSM APSQLGIFAR SSPSVATADL
EYHVQPLSTD RLGEPLHKHP AVTVSVCNLR PESRGSVHVT TGDASAAPDI RPNYLSTAGD
RLLAAQAIRH ARSLMATKAI ARFKPAEMLP GAEFQSEDEL IRRAGDIATT IFHPVGTCKM
GSDPMAVVDP SLKVHGLDGL RVVDASIMPS IVSGNTNSPV IMIAEKAADA ILRR
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