Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3609 |
Symbol | |
ID | 5318620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 38561 |
End bp | 39403 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775423 |
Product | deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001312356 |
Protein GI | 150375760 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA ATCGCAAGGT GCGGATGAAC CGCATGTTCA ACGGCGGACG CTGCCTGGAT GTCGCCATCG ACCACGGGGT CTGCAACGAG CCGTCCTTTC TGAGCGGGCT GGAAAACATG GAGGCCGTGG TAAGCGCGCT GGTCGAGGCG GGACCCGACG CCATTCAGAT GAATTTCGGC CAGGCCGATC TCCTGCAGGA GCTTCCCGGC AAGGACAGGC CGGCGCTGGT AATGCGCCTC GACATGGGCA ATCCCTATAA TCGCCTGCGT CACCGCGACA TGTGGGCGGT GTTGCAGAAC GAGGCCGAGC CCCTGATCGG GGCGCTTGCG ATGGATGCGG CCTGCGTGGT CGTCAACCTG TTCATGCTGC CGGACGAACC GGATCTCTTC CGCCAATGCG TGCAGAATAT CGCCCGCGTC CGGGCAGATT GCGACACATA TGGTATGCCG CTCATGATAG AGCCGCTCGT CATGCAGCCG GTGACCGAGC ATGGCGGCTA CATGGTCGAC GGCGACGCCG AAAAGATCGT CACCCTCACA CGTCTAGCCC GGGAGATGGG GGCCGACATC ATCAAGGCGG ATCCCACCAC TCATGCGGAG GATTTCCATC GGGTGGTGGA GACTGCGCGC TGCCCGGTTC TCGTGCGCGG CGGCGGCAAG GAGGATCTGC GGTCCGTCTT CGACAAGTCG TCAGCCTTGA TGAACCAGGG AGCGATGGGC ATGGTCTACG GGCGCAACAT CTACCAGCAC CCCGATCCGA AAGCCGTGGT GCGCGGCTTG ATGGCGATCG TGCACGAGAA TGCCAGTGGC GAAGAGGCTT TCTCGCTGTA TCGGCAGGGC TGA
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Protein sequence | MKSNRKVRMN RMFNGGRCLD VAIDHGVCNE PSFLSGLENM EAVVSALVEA GPDAIQMNFG QADLLQELPG KDRPALVMRL DMGNPYNRLR HRDMWAVLQN EAEPLIGALA MDAACVVVNL FMLPDEPDLF RQCVQNIARV RADCDTYGMP LMIEPLVMQP VTEHGGYMVD GDAEKIVTLT RLAREMGADI IKADPTTHAE DFHRVVETAR CPVLVRGGGK EDLRSVFDKS SALMNQGAMG MVYGRNIYQH PDPKAVVRGL MAIVHENASG EEAFSLYRQG
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