Gene Smed_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3609 
Symbol 
ID5318620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp38561 
End bp39403 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID640775423 
Productdeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001312356 
Protein GI150375760 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA ATCGCAAGGT GCGGATGAAC CGCATGTTCA ACGGCGGACG CTGCCTGGAT 
GTCGCCATCG ACCACGGGGT CTGCAACGAG CCGTCCTTTC TGAGCGGGCT GGAAAACATG
GAGGCCGTGG TAAGCGCGCT GGTCGAGGCG GGACCCGACG CCATTCAGAT GAATTTCGGC
CAGGCCGATC TCCTGCAGGA GCTTCCCGGC AAGGACAGGC CGGCGCTGGT AATGCGCCTC
GACATGGGCA ATCCCTATAA TCGCCTGCGT CACCGCGACA TGTGGGCGGT GTTGCAGAAC
GAGGCCGAGC CCCTGATCGG GGCGCTTGCG ATGGATGCGG CCTGCGTGGT CGTCAACCTG
TTCATGCTGC CGGACGAACC GGATCTCTTC CGCCAATGCG TGCAGAATAT CGCCCGCGTC
CGGGCAGATT GCGACACATA TGGTATGCCG CTCATGATAG AGCCGCTCGT CATGCAGCCG
GTGACCGAGC ATGGCGGCTA CATGGTCGAC GGCGACGCCG AAAAGATCGT CACCCTCACA
CGTCTAGCCC GGGAGATGGG GGCCGACATC ATCAAGGCGG ATCCCACCAC TCATGCGGAG
GATTTCCATC GGGTGGTGGA GACTGCGCGC TGCCCGGTTC TCGTGCGCGG CGGCGGCAAG
GAGGATCTGC GGTCCGTCTT CGACAAGTCG TCAGCCTTGA TGAACCAGGG AGCGATGGGC
ATGGTCTACG GGCGCAACAT CTACCAGCAC CCCGATCCGA AAGCCGTGGT GCGCGGCTTG
ATGGCGATCG TGCACGAGAA TGCCAGTGGC GAAGAGGCTT TCTCGCTGTA TCGGCAGGGC
TGA
 
Protein sequence
MKSNRKVRMN RMFNGGRCLD VAIDHGVCNE PSFLSGLENM EAVVSALVEA GPDAIQMNFG 
QADLLQELPG KDRPALVMRL DMGNPYNRLR HRDMWAVLQN EAEPLIGALA MDAACVVVNL
FMLPDEPDLF RQCVQNIARV RADCDTYGMP LMIEPLVMQP VTEHGGYMVD GDAEKIVTLT
RLAREMGADI IKADPTTHAE DFHRVVETAR CPVLVRGGGK EDLRSVFDKS SALMNQGAMG
MVYGRNIYQH PDPKAVVRGL MAIVHENASG EEAFSLYRQG