| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3585 |
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| Symbol | |
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| ID | 5318576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 12701 |
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| End bp | 13468 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775400 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001312333 |
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| Protein GI | 150375737 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.206113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGT ATAAGGACAT ATTCTCGCTG AAGGGCAGGA CAGCTCTGGT GACCGGCTCA
AGCCGCGGAA TCGGGGCTGC GATAGCTCAA GCCTATGCGG CCTATGGCGC GCGCGTGGTC
CTGCACGGAC AAAAGCCCGG CGCAACCGCC GGGGTCGAAC AGGCAATAAG CGCTGCCGGC
GGCGACGCGG TCTCGATCCA AGGCGAGCTT TCGCCGCCCG GTGCCGGCGG CGATTTGATT
TCGGCGGCGG AGACGGCCGC AGGTCCGTTG GATATTCTGG TGATCAACGC CTCGGCGCAA
ATCAACGGGT CGTTCGACGA TGTGACGCCG GAGGATTTCG CCACACAGAT CAATGTCAAC
CTTCGATCTA CGGTCGAGAT GCTGCAGACG GCCTTGCCGG GCATGGCCGA ACGCGGCTGG
GGCCGCGTCG TCAACATCGG CAGCATCAAC CAGTTGCGGC CGAAATCGAT CGTTTCCATT
TATGCGGCGA CCAAGGCAGC CCAGCATAAT CTGATCCAGA GCCTTGCTCG CGATTACGCT
CCCCGCGGCG TGTTGCTTAA CACGCTCGCA CCCGGCCTCA TCGACACGGA CCGCAACGCC
GCTCGCCGCG ACGGCGACCC GGAGGGTTGG GAAAACTACG TCCGGACGCT CAACTGGATG
GGGCGCGCAG GCGCGCCGGA CGAAATGGTG GGCGCGGCAC TCTTCCTCGC CTCAGACGCG
TGCAGTTTCA TGACGGGCGA GGCTGTTGTC ATGTCGGGCG GGTATTAG
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| Protein sequence | MSTYKDIFSL KGRTALVTGS SRGIGAAIAQ AYAAYGARVV LHGQKPGATA GVEQAISAAG
GDAVSIQGEL SPPGAGGDLI SAAETAAGPL DILVINASAQ INGSFDDVTP EDFATQINVN
LRSTVEMLQT ALPGMAERGW GRVVNIGSIN QLRPKSIVSI YAATKAAQHN LIQSLARDYA
PRGVLLNTLA PGLIDTDRNA ARRDGDPEGW ENYVRTLNWM GRAGAPDEMV GAALFLASDA
CSFMTGEAVV MSGGY
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