Gene Smed_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3584 
Symbol 
ID5318575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp11948 
End bp12646 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640775399 
ProductRES domain-containing protein 
Protein accessionYP_001312332 
Protein GI150375736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.287485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGTG GGCTTGCGGT CCGCAAACGC GTTCAATGGC AGCAGACCTA TCGCATTATC 
CGATCGATCT ATCCGCCGGT CGACCTCTTC GAAGACATTG CGGACCCACG CGACTGGGAA
GCGCTTGCTG CGGTCGAGGA GAAGACGAAT CCGCGCATTC GGCTCGAGAT CGGCGATCTG
GGCAAGATTC CGGCTGCCCG CCGAGTGTCC GGCCCCGGCG CAAGCTTCGT CATGGCACCC
TTCGTACATT GCTCGGTTCT GCGGCCGGGT CGGTTCACCA ATGGCAGCTA CGGCATTTAC
TATGCGGGGG ACAGCGAAGT GGTCGCCGTC GCCGAGACTA TTTATCACCA CGAGAAATTC
ATGCGCGCCA CCAATGAGGA GCCCGGTTGG ACTGCCGATT TCCGCATCCT GATCGGCAGC
GTTGATCGGG ATCTCGACGA CGTCAGCGCC GTGCCCGGCG TGCTGCACCC GGACGATTAT
ACCGCGTCGC ATATCGAGGG ACGCGATCTG CGGGCCGCAG GAAGCGACGG GTTGGTTTGG
GACAGTGTGC GGATGCGAGG TGGGCGCTGC ATCGGCGCCT TCTGGCCCGA CGTGATCACT
ATCCCCATCC AGGGACGGCA CTACGGCTAT CATTGGGACG GTACGCGAGT CGATTTTGTG
CGCCAGTATG ACACGGGACG TGTGCTGGCA GTGACGTGA
 
Protein sequence
MVSGLAVRKR VQWQQTYRII RSIYPPVDLF EDIADPRDWE ALAAVEEKTN PRIRLEIGDL 
GKIPAARRVS GPGASFVMAP FVHCSVLRPG RFTNGSYGIY YAGDSEVVAV AETIYHHEKF
MRATNEEPGW TADFRILIGS VDRDLDDVSA VPGVLHPDDY TASHIEGRDL RAAGSDGLVW
DSVRMRGGRC IGAFWPDVIT IPIQGRHYGY HWDGTRVDFV RQYDTGRVLA VT