| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3581 |
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| Symbol | |
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| ID | 5318085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 9659 |
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| End bp | 10666 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775396 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001312329 |
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| Protein GI | 150375733 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC CGACCGTCGC CTTTGCGATG CAGCCCGAAA GAACGCGCTA TGTCCTGACG
CCTGAGCTTC TCAAGCGGCT CGCCGGCCTC GCCCGCATCC TCGATGAACG GCCGATCACC
GAATTCGACG AGCGGGCGAA GCGATTGCTA GGCGAGGCCG AGATCCTGGT GACGGGATGG
GGTGCACCGT TCTTCGATGA GGCCGCCCTC GCCCGGGCGC CGCACCTTCG GCTTATCGTG
CATGCCGCCG GCACGATAAA GGGGCTCGTC GGCCGTAGCG TTTTCGAAGC TGGGATCAAG
GTAAGCCATG CGGCCGAGGC CAATGCCGTT CCCGTTGCCG AGTTCACGCT TGCAGCCGTG
ATCTTCGCCG GAAAACGGGT GTTTCAGTTC CGCGACATCT ATGTGGCCGA CCGGGGCCGC
GGGCGCATCC AGACCCTGCA GGGGGAAGCC ATCGGGAATC ACCGCCGCAT CGTCGGCATC
GTCGGCGCTT CGCGGATCGG GCGCCGTGTG ATCGAGCTCT TACGTCTCTT CGACTATCAA
TTGCTGCTCT ACGATCCGCT GATCAGCGAG GCCGAGGCGG AGGCACTCGG GGCCGAGAAG
GTCGATCTAG CGGCACTGAT GGCCCGCTCC GACATCGTGT CGCTGCATGC GCCCCTGCTG
CCTGAGACCC GGCACATGAT CGATGCCCGC CAGCTCGCCC TCATGAAGGA AGGAGCGACG
CTGATCAACA CTGCGCGGGG TGCGTTGGTC AATGAAGCAG CGCTCATCGC AAAGCTGCAG
ACGGGTTCGA TCAATGCAGT GATCGACGTC ACTCACCCGG AAATTCCGGA GGGGAACTCA
CCGCTCTACG ATCTGCCTAA CGTCTTTCTG ACGCCGCATA TTGCCGGCGC CATCGGCCTG
GAGCGCAGGC GTCTCGGGGA AATGGCTGTC GATGAGGTCG CCCGCTTCCT GGAAGGCAAG
CAGCTGCTCT TCGAAGTGCT CAAGCAGGAC CTGGCGAGGA TCGCATGA
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| Protein sequence | MSLPTVAFAM QPERTRYVLT PELLKRLAGL ARILDERPIT EFDERAKRLL GEAEILVTGW
GAPFFDEAAL ARAPHLRLIV HAAGTIKGLV GRSVFEAGIK VSHAAEANAV PVAEFTLAAV
IFAGKRVFQF RDIYVADRGR GRIQTLQGEA IGNHRRIVGI VGASRIGRRV IELLRLFDYQ
LLLYDPLISE AEAEALGAEK VDLAALMARS DIVSLHAPLL PETRHMIDAR QLALMKEGAT
LINTARGALV NEAALIAKLQ TGSINAVIDV THPEIPEGNS PLYDLPNVFL TPHIAGAIGL
ERRRLGEMAV DEVARFLEGK QLLFEVLKQD LARIA
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