Gene Tmel_R0028 details

Gene Information

• Locus tag: Tmel_R0028
• ID: 5298270
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 637219
• End bp: 640158
• Gene Length: 2940 bp
• GC content: 59%
• IMG OID: 640768867
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.973163
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAAGGTATT AAGGGCACGC AGTGGATGCC TAGGCGGCAG GAGGCGAAGA AGGGCGTGGC 
AAGCTGCGAA AAGCCCGGGG GAGCTGCAAG CGAGCGTAGA TCCCGGGATA CCCGAATGGG 
GGAACCTGGG TAGCTGAAGA AGCTACTCAC CCGAGAGGGA GCGAACCGGG GGAAGTGAAA 
CATCTCAGTA CCCCGAGGAA AAGAAATCAA AAGAGATTCC CTGAGTAGAG GCGATCGAAA 
GGGGAGGAGC CTAAACCGGC GGCGGGAGCT GTCGGGGTAG TGGGACAAGT CCGGGCGTAA 
GCCGGGGAGT AAAAAATCCT TACTCTAGCC GAATGGTCTG GGAAGGCCAA CCGGAGAGGG 
TGAAAGTCCC GTAGGCGAAA GGGTAAGGAC TTCCTGGGGC TTGATCCCGA GTACCACGGG 
ACACGAGGAA TCCTGTGGGA ATCAGGGGGG ACCACCCTCC AAGGCTAAAT ACTCCCTGCC 
GACCGATAGC GAAACCAGTA CCGTGAGGGA AAGGTGAAAA GCACCCCGGA AGGGGAGTGA 
AAGAGACCTG AAACTGCGTG CCTACAAGAA GTCGGAGCCC GAGGGGGTGA CGGCGTGCCT 
TTTGATTAAT GAGCCTGGGA GTTGTCGTAC CTGGCGAGGT TAAGCCGTGG GAGGTGGAGC 
CGAAGCGAAA GCGAGTCCGA AAAGGGCGAG CAGTCAGGTA CGGCAGGCCC GAAGCCGGGT 
GAGCTACCCA TGGCCAGGGT GAAGGTAGGG TAAAACCTAC TGGAGGCCCG AACCGGTGGA 
TCGTGAGACA TCCTCGGATG AGCTGTGGGT AGGAGTGAAA AGCTAACCGA ACCCGGTGAT 
AGCTGGTTCT CCCCGAAATG CATTTAGGTG CAGCCTCAGG TGGTCTGTAC TGGGGGTAGA 
GCGCTGATAG GGCTAGGGGG GCGACCTCCA ACCCCTGTCA AACTACGAAT CCCGGTACAC 
AAAGCCTGGG AGTGAGCCTG TGGGGGATAA GCTCCACAGA CGAGAGGGGA ACAACCCAGA 
CCGTCGGCTA AGGGCCCGGA GAGATGGCTA AGTGTGGAAG GATGTTGTGC GTCCCAGACA 
ACCGGGATGT TGGCTTAGAA GCAGCCATCA TTTAAAGAGT GCGTAACAGC TCACCGGTCG 
AGACGCACAG CGCCGAAAAT GTAACGGGGC TGAAGCCATC CCCCGAAGCC GCGGACCAGC 
GTAAGCTGGT GGTAGGGGAG CGTTCCGCGA TAGGGAGAAG GCAGACTTGT GAGAGCTGCT 
GGACGAAGCG GAAGTGAGAA TCCAGGCATG AGTAAGCGAG AGGAGAGTGA GAATCTCTCC 
CCCCGGAAGC CTAAGGGTAC CTGGGGAAGG GTCGTCCGCC CAGGGTTAGT CGGGACCTAA 
GGTGAACCCG AGAGGGGTAG CCGATGGGAA ACCGGTTAAT ATTCCGGTAC CACCTGTATA 
TCGAAAGTAT GAGGGGGGAC GCAGGAGGGC AGGCTCCGAG GTCAAGTGGC AAGGCCTTCC 
AAGCGGTTAG GCGAAGAGGG CAGTAGGGAA ATCCGCTGTC TGAGCTGAGC CGTGAAGGGG 
AGGACCGAAT GGTCCAACGG AGCTGATCCC ACACTGCCGA GAAAAGCCTC GCATACTGAT 
ATACAGGTGC CCGTTCCGCA AACCGACACA GGTAGGCGGG CTGAGAAAGC TAAGGGGAGC 
GGGATAACCC TTGCCAAGGA ACTCGGCAAA TTGACCCCGT AACTTCGGGA GAAGGGGTGC 
CGCGGTAGGT TGAACCCAGG GGAAGGGGAG ACCTGGAAAC TGGGGGAGGC CGAGGCGGTT 
GCAGAGGCAA GGCCCTGGCG ACTGTTTACC AAAAACACAG GTCTCTGCGA ACTCGTAAGA 
GGAAGTATAG GGACTGACGC CTGCCCAGTG CCGGAAGGTT AAGGGGAGGG GTGAGAGCCC 
CGAACCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC 
CTTGTCGGGT AAGTTCCGAC CTGCATGAAT GGCGTAACGA CTGGGGCACT GTCTCGGCAG 
GGGACCCGGC GAAATTTCAA TCTGGGTGAA GATGCCCAGT ACCCGCAGCT AGACGGAAAG 
ACCCCGTGGA GCTTTACTGC AGCCTGGTAT TGGGCTTTGG TGCATCGTGT ACAGGATAGG 
TGGGAGGCGA AGAACCCGGC TCGCCAGGGT CGGGGGAGCC GACGGTGGGA TACCACCCTC 
GGTGTACCGG AGTTCTAACC TGCGTCTGTG AAGAGCAGGC GGGGGACAGT GCCAGGTGGG 
TAGTTTGACT GGGGCGGTCG CCTCCTAAAG AGTAACGGAG GCGCGCAAAG CTCGGCTCAG 
GTGGGTTGGA AATCCACCGA AGAGTGCAAG GGCATAAGCC GGGCTGACTG CGAGACTGAC 
GGGTCGAGCA GAGGGGAAAC CCGGTCCTAG TGACCCGGCG ACTCCGAGTG GAAGGGTCGT 
CGATCAACGG ACAAAAGTTA CCCCGGGGAT AACAGGCTAG TCTTGCCCGA GAGTTCACAT 
CGACGGCAAG GATCGGCACC TCGATGTCGG CTCATCCCAT CCTGGGGCTG AAGCAGGTCC 
CAAGGGTTAG GCTGTTCGCC TATTAAAGGG GTACGTGAGC TGGGTTCAGA CCGTCGTGAG 
ACAGGTCGGT CCCTATCTGC TGCGGGCGTA GGAGGTTTGA GGGGGCTCGC CCATTGTACG 
AGAGGACCTG GGTGAGGGAG CCACTGGTGT ACCGGCTGTC CTGCCAAGGG CATACGCCGG 
GTAGCTACGC TCCTGAGTGA TAACCGCTGA AAGCATCTAA GCGGGAAACA CGCCCCAAGA 
TGAGACCTCC CATCCCGAAA AGGGAGTAAG GCCGGTTCGA GAAGAGGACC TAGATAGGCT 
GGTGGTGGAA GCGCAGCAAT GCGTGGAGCC AACCGGTACT AATCGGCCGA GGCCTTCACC 

 

Protein sequence