Gene Tmel_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1929 
Symbol 
ID5298459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1914310 
End bp1915128 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content33% 
IMG OID640770195 
Productpeptidase M55, D-aminopeptidase 
Protein accessionYP_001307146 
Protein GI150021792 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2362] D-aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTT ATGTTTCAGT TGATTTTGAG GGCTTGGGTG GAATAACTCA ATGGTCAGAT 
GTTGTGCATG GTGTGAGGTA TAAACAAAAT ATTTTGATAG AACAACTTGA AAGTTTTTTG
GATGCTGTAG GTGAAAATTA CGTGCTTGTT TCTGATTCCC ATGCTATGGG TGACAATATT
TTGTGGGATA TTACGCGAAA ATACGATAAT GTAGAGATAA TCTCAGGTAA TTTTAGAAAA
AATTACATGA TGACAGGTTT GGATGAGACA TTTGATAGGG TTGTCTTTTT TGGATACCAC
GCGGGTATAG GTACAAGGTA CGCAGTTATG GATCATACTT ATTCATCTTC ATCGATTTTT
AATGTTTGGA TAAATGGAAA ATTGATGAAT GAAGCCCTGA TAAATGCAGC TTATGCGGGA
ATTTTTAATG TACCAGTGGC TATGATTGTT GGTGATGATA AATTAAAAGG GCAAGTTAAA
TTAAAAAATC TGTTTTATGT TGAAACAAAA ACTTCTCTTG GACGTTTTTC GGCAAAACAT
AGATCTATGA AAAAAGTTAT TAACGATATA AAGGAAACTA CTAAAAAAAT GCTTGAGATT
CCAAAAGAAG AGTTTGAGAT TTTTAAATTT GATACTCCTG TCGAGCTTGT AGTAGAATTA
TCAGATACAG CACGTGCTGA TTTAATAGAA ATGATACCAT TAGTTGAAAG GTTTGATGGA
AGAAAGGTGC GAGTTGTCCA TGAAGATTAT AAGGTGATTT TTGATGCAAT ATTGAGTATA
GCGTATATGG CATCAATTGT TAAATATATT GGGAGGTGA
 
Protein sequence
MKIYVSVDFE GLGGITQWSD VVHGVRYKQN ILIEQLESFL DAVGENYVLV SDSHAMGDNI 
LWDITRKYDN VEIISGNFRK NYMMTGLDET FDRVVFFGYH AGIGTRYAVM DHTYSSSSIF
NVWINGKLMN EALINAAYAG IFNVPVAMIV GDDKLKGQVK LKNLFYVETK TSLGRFSAKH
RSMKKVINDI KETTKKMLEI PKEEFEIFKF DTPVELVVEL SDTARADLIE MIPLVERFDG
RKVRVVHEDY KVIFDAILSI AYMASIVKYI GR