Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1929 |
Symbol | |
ID | 5298459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1914310 |
End bp | 1915128 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640770195 |
Product | peptidase M55, D-aminopeptidase |
Protein accession | YP_001307146 |
Protein GI | 150021792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0142981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAATTT ATGTTTCAGT TGATTTTGAG GGCTTGGGTG GAATAACTCA ATGGTCAGAT GTTGTGCATG GTGTGAGGTA TAAACAAAAT ATTTTGATAG AACAACTTGA AAGTTTTTTG GATGCTGTAG GTGAAAATTA CGTGCTTGTT TCTGATTCCC ATGCTATGGG TGACAATATT TTGTGGGATA TTACGCGAAA ATACGATAAT GTAGAGATAA TCTCAGGTAA TTTTAGAAAA AATTACATGA TGACAGGTTT GGATGAGACA TTTGATAGGG TTGTCTTTTT TGGATACCAC GCGGGTATAG GTACAAGGTA CGCAGTTATG GATCATACTT ATTCATCTTC ATCGATTTTT AATGTTTGGA TAAATGGAAA ATTGATGAAT GAAGCCCTGA TAAATGCAGC TTATGCGGGA ATTTTTAATG TACCAGTGGC TATGATTGTT GGTGATGATA AATTAAAAGG GCAAGTTAAA TTAAAAAATC TGTTTTATGT TGAAACAAAA ACTTCTCTTG GACGTTTTTC GGCAAAACAT AGATCTATGA AAAAAGTTAT TAACGATATA AAGGAAACTA CTAAAAAAAT GCTTGAGATT CCAAAAGAAG AGTTTGAGAT TTTTAAATTT GATACTCCTG TCGAGCTTGT AGTAGAATTA TCAGATACAG CACGTGCTGA TTTAATAGAA ATGATACCAT TAGTTGAAAG GTTTGATGGA AGAAAGGTGC GAGTTGTCCA TGAAGATTAT AAGGTGATTT TTGATGCAAT ATTGAGTATA GCGTATATGG CATCAATTGT TAAATATATT GGGAGGTGA
|
Protein sequence | MKIYVSVDFE GLGGITQWSD VVHGVRYKQN ILIEQLESFL DAVGENYVLV SDSHAMGDNI LWDITRKYDN VEIISGNFRK NYMMTGLDET FDRVVFFGYH AGIGTRYAVM DHTYSSSSIF NVWINGKLMN EALINAAYAG IFNVPVAMIV GDDKLKGQVK LKNLFYVETK TSLGRFSAKH RSMKKVINDI KETTKKMLEI PKEEFEIFKF DTPVELVVEL SDTARADLIE MIPLVERFDG RKVRVVHEDY KVIFDAILSI AYMASIVKYI GR
|
| |