| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1918 |
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| Symbol | |
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| ID | 5297032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1902634 |
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| End bp | 1902999 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640770184 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_001307135 |
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| Protein GI | 150021781 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0017385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTAA AAGAATTTAA AGAGTTTAGA GAAAAAATGA ATGAAAAAAT CTTGGAATCT
GGTACTTTAA ATACAAAAAG GTTTTTTAAT TTAGATGGTA ATGTTTACAA AAATGGTGCT
TTGGATAGTA AAACTAAAGA ATTATTAGGA TTAGTTGCAT CTATGGTGTT GAGGTGTGAC
GATTGTATAA CTTATCATAT TATAAAATGT GTAGAAAATG GAGTACGTGA TGAAGAATTC
TTTGAAGCTT TTGATGTGGC TTTAATTGTT GGTGGTTCTA TAGTTATTCC ACACCTTAGA
CGTGCGGTAA GTACATTGCA AGAAATTAGG GAGATGCAAA AAAATGAGGG AACTATTTCT
TTTTGA
|
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| Protein sequence | MELKEFKEFR EKMNEKILES GTLNTKRFFN LDGNVYKNGA LDSKTKELLG LVASMVLRCD
DCITYHIIKC VENGVRDEEF FEAFDVALIV GGSIVIPHLR RAVSTLQEIR EMQKNEGTIS
F
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