Gene Tmel_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1910 
SymbolrnhB 
ID5297547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1895015 
End bp1895665 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content30% 
IMG OID640770176 
Productribonuclease HII 
Protein accessionYP_001307127 
Protein GI150021773 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTG CAGGTGTGGA TGAAGCAGGA AGAGGTCCTT TGTTTGGTCC GGTAGTTGCA 
TCTGCAGTTG TCTTAAAAAA AGAAATTTAT GGAATTACTG ATTCTAAAAA GTTGACCTTA 
AAGCAAAGAG AAGAGTTGTT TATGGAAATA ATAAGAAATT CGTATTTTGG AATAGGATTT 
GCTAGTTCTT CGGAAATAGA TAAGCTAAAT ATTTTGCATG CTACTGAACT TGCTATGAAT 
AGAGCTTTGG CAATGCTTGA ACGAAAAATT AGGTTTGATA TGGTATTAGT TGACGGAAAA 
AATTTAAAAT TAGATTATAA ATCTAAGTGT ATAGTGAAAG GAGATGTGTT GATAAAAGAA 
ATTTCTGCCG CTTCAATAAT TGCGAAGGTG GTACGTGATA AGATAATGAC TTTTTATTCT 
AAAAAATTTT CTAATTATGC ACTTGAAAAA CACAAAGGTT ATCCAACAAA GGATCATATA 
AAGCTAATTG AAAAATATGG TTTAACACCG GAACATAGAT TAACTTTTAA ACCGATTACA 
AAAATGTTGT CAATTAATAA ACTTGAAGAA TGGTATAAAA GTGATATTAT AGATGAAGAG 
AGATATAAAA AGATTATAGA GAAATTGGGG GTGCCTTTGT TTGGAGTTTA A
 
Protein sequence
MIVAGVDEAG RGPLFGPVVA SAVVLKKEIY GITDSKKLTL KQREELFMEI IRNSYFGIGF 
ASSSEIDKLN ILHATELAMN RALAMLERKI RFDMVLVDGK NLKLDYKSKC IVKGDVLIKE 
ISAASIIAKV VRDKIMTFYS KKFSNYALEK HKGYPTKDHI KLIEKYGLTP EHRLTFKPIT 
KMLSINKLEE WYKSDIIDEE RYKKIIEKLG VPLFGV