| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1907 |
|---|
| Symbol | |
|---|
| ID | 5297046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1893161 |
|---|
| End bp | 1893976 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640770173 |
|---|
| Product | tetrahydrofolate dehydrogenase/cyclohydrolase |
|---|
| Protein accession | YP_001307124 |
|---|
| Protein GI | 150021770 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTG ATGTAAAACC TTTGTATGAA GATATTAAGG TAAATTTGTT GAAAAGAATT
GAAAAATTAA AGAGAACACC TAAACTTGTT GCTGTTACAT TCAAACCCGA TCCATCAACG
GTTAGTTACC TAAAAAGTCA AGAAAAAGCA GCTAAAAGAT TTGGATTAGA TTATGAAATT
TTTGAGGGAA ATAGCCCAAA AGGTGTGTTA AAAATTTTAG CAGAACTTTC ACGGGATAAT
AATGTTAATG GTATTTTTGT TACACATCCA TTGTCTCAGG TAAATGAGAT GGAAATATTT
GAAAATCTTG TTCCAAGTAA GGATATTGAA GGAAGACATC CGTACAATTT AGGAATGTTG
GCATATGGCG AGGAGTTTTT TGCACCGTGT ACCGCAGAAG CCGTTGTAAG GATTATGGAA
AATGAAATAG GAATTCCAGG TAAAAATGTG GTAATAGTTG GAAGAAGTAA TACAGTTGGA
AAACCATTGG CAATTATGTT ACTTAGGAGA GATAGAAGTG CTACTGTTAC TGTATGTCAC
ACAAAAACGA GAAATTTATC GAGTATTACA AAAGGTGCAG ATGTAGTAGT AGCCGCCGCA
GGAAGGCCTG GTTTAATAAC GGTTGATATG GTAGAAAAAG ATTCGATTAT TATAGATGTT
GGTATAAACG TTACAGATGA GGGGATTATA GGGGATGTGA GTAAAGATGT AGCTAATTTT
GCAAAAGTTA CTCCTGTGCC AGGTGGAGTG GGTAAAATTA CTACAATATT ATTAATGGAA
CATTTAGTGA AATCTGCAGA GAAAATGAAT TTTTAA
|
|---|
| Protein sequence | MIIDVKPLYE DIKVNLLKRI EKLKRTPKLV AVTFKPDPST VSYLKSQEKA AKRFGLDYEI
FEGNSPKGVL KILAELSRDN NVNGIFVTHP LSQVNEMEIF ENLVPSKDIE GRHPYNLGML
AYGEEFFAPC TAEAVVRIME NEIGIPGKNV VIVGRSNTVG KPLAIMLLRR DRSATVTVCH
TKTRNLSSIT KGADVVVAAA GRPGLITVDM VEKDSIIIDV GINVTDEGII GDVSKDVANF
AKVTPVPGGV GKITTILLME HLVKSAEKMN F
|
|---|
| |