| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1904 |
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| Symbol | |
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| ID | 5297900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1890435 |
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| End bp | 1891343 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640770170 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001307121 |
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| Protein GI | 150021767 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATT TCATTGGAAA GAAGAATATA TTTATAGTAA TTTCTCTCTT ATTAATAGTG
GCATCTCTAG TAAGCATTTT TTCAAAAGGT TTTAACTTAG GAGTGGAATT TTTAGGTGGT
TCTGAGATTA TTTTAAGCGT CCAAGATAAC GTTGATGAGT CTTTTGTTAG AGAGACAATA
AAGAACCTGG CACCTGAATT TGAAAGTGCA AGGGTTACAC AAATAAAAAG TATTGACGAT
CCAAAAGGTA TTACAAAGTT TTCTATTGTA GTTTCACCTC GTGATGAAAA TGGAGAATTG
AGGGTTTATT CTGGTGAAGA AAAGGAGCAA GTTAGTAATA AAATAGTTGA GTTATTTAAA
GAAAAAGGGA AACCAGCAAA GGTAATTGGA TTTAATGAAA CAAGTGGGTA TGCGTCTCAA
GAAATCAAAA ATTTAACTTG GAAGGCTGTT GTTTTTACTT TACTTGCAAT TCTTTTGTAC
ATAACTTTGA GATTCCAATT TGTTTTCGGA GTAGGTGCAG TAGTTGCTCT TATTCATGAT
GTTGTAATTA CATTGGGATT CTTTTCTTTC TTTAATTACG AGCTTAATGT TGCTGCGATA
GCTGCAGTAT TAACGCTTAT TGGATATTCA TTAAACGATA CTATAGTTGT TTACGATAGA
ATAAGGGAAA ATTTAAAAAG AACCAGAGGT AAGAGTATAG AAAATATTGT GAACGATAGT
ATAAATCAAG TTATTAAGAG GACGATTAAT ACATCTCTTA CAACATTTAT TGTTATATTT
GTGCTATTGT TATTCTCAGG AAATAGCATA AAGCCGTTTG CCTTTGGAAT GACTATTGGA
ACAATTATTG GTACTTATTC ATCATTGTAT ATAGCAAGTC CCGTTGTGAT AAAATGGATA
AAAAAATAA
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| Protein sequence | MIDFIGKKNI FIVISLLLIV ASLVSIFSKG FNLGVEFLGG SEIILSVQDN VDESFVRETI
KNLAPEFESA RVTQIKSIDD PKGITKFSIV VSPRDENGEL RVYSGEEKEQ VSNKIVELFK
EKGKPAKVIG FNETSGYASQ EIKNLTWKAV VFTLLAILLY ITLRFQFVFG VGAVVALIHD
VVITLGFFSF FNYELNVAAI AAVLTLIGYS LNDTIVVYDR IRENLKRTRG KSIENIVNDS
INQVIKRTIN TSLTTFIVIF VLLLFSGNSI KPFAFGMTIG TIIGTYSSLY IASPVVIKWI
KK
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