Gene Tmel_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1900 
Symbol 
ID5297389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1885989 
End bp1886621 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content30% 
IMG OID640770166 
ProductABC transporter related 
Protein accessionYP_001307117 
Protein GI150021763 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAATG TAAATACCAT TTTTCACAAA AATGAATTAG TATTGTTGTT GGGGCATAAT 
GGTAGTGGAA AGTCAACATT GCTAAAAGCA ATGGCTGGTT TAGTTAATTT CAGCGGAGAG 
ATAAATACGG AAAATAATTT ACCTCATTAC CTTTTAACCG GATATGTTTT TCAAAACCCG 
GAAACTCAAA TTATTGGAAG TACTGTATGG GAGGATGTTA TTTTTGGACT TGAAAATTTG 
GGATTGAAAA AAGAGGAAAT TAAAAAAAGA GCAATGGAAA TTTTAAAAAT AACTGGTTTA 
CTAGAATTCA AAGATATAGA ACCACATAAT TTATCTGGAG GGCAGAAACA AAAGCTTGCA 
ATTTCATCAA TTTTAGTTAT GAAACCGGAC TATTTGTTGT TAGATGAGCC TCTTACAATG 
TTGGATAAAA ATGATAGAAA AGTTATTAAA GAGCTTATTG GTAACTTAAA AAAAATAGGG 
TTGGGAATAA TAATTGCAAC TCATTTGCCT GAAGCTTTTT TAGATATATC AGATAGAGTG 
ATAATTATGG ATAGAGGAAA TATTGTAAAA GATAGTAGGA AGGTTTTTGA AACAGTTAGG 
TTATATATTA ATGAGGTGGA GAGTCATGAT TGA
 
Protein sequence
MENVNTIFHK NELVLLLGHN GSGKSTLLKA MAGLVNFSGE INTENNLPHY LLTGYVFQNP 
ETQIIGSTVW EDVIFGLENL GLKKEEIKKR AMEILKITGL LEFKDIEPHN LSGGQKQKLA 
ISSILVMKPD YLLLDEPLTM LDKNDRKVIK ELIGNLKKIG LGIIIATHLP EAFLDISDRV 
IIMDRGNIVK DSRKVFETVR LYINEVESHD