| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1898 |
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| Symbol | |
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| ID | 5297765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1883983 |
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| End bp | 1885119 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640770164 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001307115 |
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| Protein GI | 150021761 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGAAT CATTTTTGGC ATTTTTTCAA AGTACAGCGT TTATGCATTT AAGTTATGGA
AATTTGATAA TGTTTGCAAT AGCAGGACTC CTTATCTATA TTGCTATTGA GAAAGATGCC
GAACCATTGC TTTTAATCCC TATTGCATTT GGGATTATTT TAGCGAATAT ACCACCAGAA
ATTACTGGTA TACTAAATTC TCCAACGGAT AATTCTCCAG GCGGAGTGTT ATGGTATTTG
CAACAAGGTT TGGTGTTAGG AATTTATCCT CCACTTATTT TTCTTGGAAT AGGGGCTTTA
ACTGATTTTT CATTTATGCT TTCATATCCA ATAACGATAT TTTTGGGTGG AGCGGCACAA
ATGGGTATTT TTATTACATT TTTACTTGCA AGAGTTTTTG GTTTTACTTT AAAACAAGCT
GCTTCAATAG GAATAATTGG CGGAGCTGAT GGTCCTACCT CAATATTTAT AACTTCAAAA
TTTTCTCCTG AATTATTGTC AATTATTGCT ATATCTGCTT ATTCGTATAT TGCATTAATT
CCAGTTTTAC AACCTATTGT TTCTAAGTTA ATAACTACTA AAGAAGAAAG AAAGATAAAA
ATGAAACCTC CAAGAAAGGT TACAAAGGCT GAAAGAGTGC TTTTTCCAAT AGTAACCACA
ATTATTGTTG CATTAATTGT TCCGAAAGCT TTACCTTTAG TTGGAATGTT AATGTTCGGA
AATCTTTTAA GAGAAGCAGG AGTTGTAAAA CGTTTAGTTG AGGCGGCAAG TAGATATATT
TTAGATACTG TAACTATATT ATTGTGTGTT TCTGTTGGAT CTTCAGCACG AGCCGATGTG
TTTTTAAAGC CGCAGTCGTT ACTAATCTTT GGTATGGGGG CGGTTGCTTT TGTAACTTCA
ATTTTTTCTG GTATTATGTT TGCAAAATTT ATGAATTTGT TCTTAAAGGA TAAAATTAAT
CCTTTAATAG GTGGTGCAGG AGTTTCTGCG GTTCCTGATT CATCAAGAGT TGCTCAAAGG
ATAGCTCAAG AAGAAGATCC CACTAATTTT ATTTTAATGC ATGCTATGGG GCCAAATGTT
GCAGGTGTAA TTGGTTCTGC AGTTGCAGCT GGTATATTCT TATCATTAAT TAAGTGA
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| Protein sequence | MLESFLAFFQ STAFMHLSYG NLIMFAIAGL LIYIAIEKDA EPLLLIPIAF GIILANIPPE
ITGILNSPTD NSPGGVLWYL QQGLVLGIYP PLIFLGIGAL TDFSFMLSYP ITIFLGGAAQ
MGIFITFLLA RVFGFTLKQA ASIGIIGGAD GPTSIFITSK FSPELLSIIA ISAYSYIALI
PVLQPIVSKL ITTKEERKIK MKPPRKVTKA ERVLFPIVTT IIVALIVPKA LPLVGMLMFG
NLLREAGVVK RLVEAASRYI LDTVTILLCV SVGSSARADV FLKPQSLLIF GMGAVAFVTS
IFSGIMFAKF MNLFLKDKIN PLIGGAGVSA VPDSSRVAQR IAQEEDPTNF ILMHAMGPNV
AGVIGSAVAA GIFLSLIK
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