| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1892 |
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| Symbol | |
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| ID | 5297210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1878424 |
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| End bp | 1879647 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640770159 |
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| Product | diaminopimelate aminotransferase |
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| Protein accession | YP_001307110 |
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| Protein GI | 150021756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA AAATTATACA GGCTGTTGAA AAGCTTAAGC CAGAAATAAT TGAATCCATG
AAAAAGTTTA TATCAATTAA CTCAGTTAAT CCTAGATCAG GAGGCCCCGG TGAAAAAGAG
ATGGCAGAAT GGTTAGAAAA TTTAATTAAA GATTGGGGAT TTGATGTAAT AGAAAGACAT
GATGCAAAAG ACATTGCAGT ACCTTATGGT TATCGACCAA ACATTGTTGC AAAAATCCTA
GGAAGCGAGG GGAAAAGAAC AATATGGATT GTAACTCATA TGGATAAAGT ACCTGAAGGA
GATTTATCAT TATGGAATAG TGATCCTTTC ACACCTGTTG AAAAAGATGG AAAAATTTTT
GGAAGAGGTG CTGAAGACAA TGGTTCATCA CTAATTGCAT CTCTTTACGC TGCAAAAACA
ATATTATCAT TAAAAATAAA ACCCAAAGAT AATATAGCGC TCGCATTTGT ATCAGATGAA
GAAACAGGTT CCGATTATGG GATAAAACAT CTTGTAAAAC TGGGAATTTT TGGAAAAGAC
GACCTGTTCA TAGTACCCGA TTCAGGTGAA CCTGATGGCT CTTTCATCGA AATTGCAGAA
AAATCCATTG CTTGGTTAAA AATAACAACC AAAGGAAAAC AAGCACATGC TTCAAGACCA
GATATTGCAA AAAATGCACA CAGGTTTGGA TTAAAATTTG CATCGCAACT TGATGAATAT
TTAAATGAAA AATACACCCT TGAAAATAAA CTATTTGATT ATCCAAAAAG TTCTTTTGAA
CCAACAAAAA AAGAAGGAAA TGTCGATAAC ATAAATACAA TACCTGGAAC CGATATAGTT
TATTTTGATT GTAGAATACT CCCAAACTAT AACCTTGAAG AAATTTTCTC CGATATAAAA
AGGTTTACCG AAGAATTTTC AAAAAAATAC AACATCGAAA TAGAAATTGA AAAGTTACAA
TTTGAACAAG CAGCACCACC AACCGATGAA AACTCGGAAA TAGTAAAAAA GCTAAAAAAT
GCAATAAAAG AAATGAGAAA CATTGAACCA AGAGTAGGTG GAATAGGTGG AGGAACTTGT
GCTGCCATTG TTAGAAGAGC AGGATTTCCA GCAGTTGTTT GGGCTACAAT TGATGAAACT
GCTCACCAAC CAAATGAATA TGTAGTTATA AATAATTTAA TAGAAGATAC AAAAGTTTAC
ACATACCTAA TCGCAAATTC TTAA
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| Protein sequence | MKKKIIQAVE KLKPEIIESM KKFISINSVN PRSGGPGEKE MAEWLENLIK DWGFDVIERH
DAKDIAVPYG YRPNIVAKIL GSEGKRTIWI VTHMDKVPEG DLSLWNSDPF TPVEKDGKIF
GRGAEDNGSS LIASLYAAKT ILSLKIKPKD NIALAFVSDE ETGSDYGIKH LVKLGIFGKD
DLFIVPDSGE PDGSFIEIAE KSIAWLKITT KGKQAHASRP DIAKNAHRFG LKFASQLDEY
LNEKYTLENK LFDYPKSSFE PTKKEGNVDN INTIPGTDIV YFDCRILPNY NLEEIFSDIK
RFTEEFSKKY NIEIEIEKLQ FEQAAPPTDE NSEIVKKLKN AIKEMRNIEP RVGGIGGGTC
AAIVRRAGFP AVVWATIDET AHQPNEYVVI NNLIEDTKVY TYLIANS
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