Gene Tmel_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1889 
Symbol 
ID5296757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1875057 
End bp1876223 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content26% 
IMG OID640770156 
Producthypothetical protein 
Protein accessionYP_001307107 
Protein GI150021753 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TTTTGAAAAA AAATATAAAA AATAGAATAA GAAATGGACA TCCTTGGATA 
TATGAAAATG AGATTGAAAG TTATGAAGAA AACATAAAAA ATGGTAACAT TGTTGATATA
TTTAATCATG AAAATTTCTT TATTGGAAAA GGATATATAA ACTTTAACTC AAAAATTAGG
ATAAGAATAT TAACCAGAAA AAATGAATCT ATTGAAAAGG ATTTTTTCAA AAAAAGATTT
ATTTCGGCAT TAAAAAGAAG AAATACAAAA GAAAATAGTT TCAGGGTAAT ATTTTCAGAG
GCAGATAATT TACCAGGTTT AATTGTTGAT AAATTTGACA ATTACATTGT ATTAGAAATT
AACACTTTGG GAATGGAAAG ATTCAAAAGC TTAATAATTG ATACAATAGT AGAATTATTC
AATCCAAAGG GAATATTTGA AAAATCAAAC AACTCATCAA GAGAAAAAGA AGGATTAGAA
AAATTTTCTG GATGGGTTTA TAAAAACGGA CCAGAGTTAA TTCCATTTAA TTTAAATGGT
TTAAAATTTT TTGCAGATAC AAAAGGGCAA AAAACAGGAT CATTTCTTGA TCAAAGAATA
AATGCAAAAA GTTTAAAAAA CTTCTCCAAA AATAAAGTTT GTCTTGATGC ATTTTGCTAT
ACTGGAAATT TTGGAATGCA TATGTTATTG TATGGTGCAA AACATGTAAC ATTTTTAGAT
TACTCTCAAC GTGCAATAGA TATAGTAAAC TTAATAGCAA AAGAAAATGG CTTTAAAAAT
TACGAGACAA TAGTTGGAAA TGCCTTTGAT ATTCTCAAAA ATTTTGACAA ATCTTCAAAA
TACTTCGACA TTGTCTCTAT TGATCCTCCT TCCTTTGCAA AAAAGGCAAC TAACAAACAA
AGCGCATTTA AAGGATATAA AGAAATTAAT CTCAGAGCTA TGAGAATAAC TAAAGACAAT
GGATTAATAG CAACTTCCTC GTGTACACAA GTAATTTCAG AAGAAGAATT TGAACATATC
TTATTTTCCG CTGGAGTTGA CTCTGGAAAA TTAATAAGAG TTATCCATAG AGGTGATCAA
CCTTTTGATC ATCCTTATGT TTTAAATATT CTTGAAACAA AATATTTAAA ATTCAGATTA
CTTCAAATAG AAAATATAAA GGAGTAA
 
Protein sequence
MKVFLKKNIK NRIRNGHPWI YENEIESYEE NIKNGNIVDI FNHENFFIGK GYINFNSKIR 
IRILTRKNES IEKDFFKKRF ISALKRRNTK ENSFRVIFSE ADNLPGLIVD KFDNYIVLEI
NTLGMERFKS LIIDTIVELF NPKGIFEKSN NSSREKEGLE KFSGWVYKNG PELIPFNLNG
LKFFADTKGQ KTGSFLDQRI NAKSLKNFSK NKVCLDAFCY TGNFGMHMLL YGAKHVTFLD
YSQRAIDIVN LIAKENGFKN YETIVGNAFD ILKNFDKSSK YFDIVSIDPP SFAKKATNKQ
SAFKGYKEIN LRAMRITKDN GLIATSSCTQ VISEEEFEHI LFSAGVDSGK LIRVIHRGDQ
PFDHPYVLNI LETKYLKFRL LQIENIKE