Gene Tmel_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1885 
SymbolgcvT 
ID5297571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1870096 
End bp1871187 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content31% 
IMG OID640770152 
Productglycine cleavage system aminomethyltransferase T 
Protein accessionYP_001307103 
Protein GI150021749 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA CACCATTATA TGAAGAACAC GTAAAGCTTG GAGCAAAAAT GGTTGATTTT 
GCTGGATTTA ACATGCCTAT ACAATACACA AGTATTAAAG ATGAAGTATT AGCTGTTAGA
AAAAATGTCG GTATGTTTGA CGTTTCTCAC ATGGGGGAGG TAATAGTTGA AGGTAAAGAT
TCAACAAAAT TTGTAGATTT TTTAATTACC AATGATTTTA AAAATCTAAA ACCTGGTGAA
ATCGTATATA CTGCCATGTG TAATGAAAAC GGTGGATTTG TAGATGATTT ACTTGCATAC
AAAATCTCAG AGGAAAAAGC TATGTTGGTA ATCAACGCAT CAAACATTGA AAAAGATTTT
AGTTGGATGA AAAAAATTTC AGAATCATTT GACGTAACTC TTGAAAATAA ATCTGATGAA
TATGTACTTA TTGCTGTACA AGGTCCAAAC GCTCAAAAAA CATTACAAAA AATTACGAAT
GTTGATTTAG AACAAATAGG TTACTACACT TTTACAGAAG GAAATGTGCT GGATATCAAA
GCTATAATAT CTAGAACAGG ATATACAGGA GAAGATGGAT TTGAAATTTA TACTACTGAC
AAAGATGGAA TTATAAAAAT ATGGAAAAAA CTTTTAAATT TAAACGTAAT TCCTGCAGGA
TTGGGTGCAA GAGATTGTTT GAGATTAGAA GCTTCTCTAT TACTATATGG AAACGATATG
GATGAAACTA TAACACCTCT TGAAGTAGGT ATAAAATGGG CAGTGAAATT CGAAAAAGAT
TTTATGGGAA AAGAAGCACT CAAAAGACAA TTGGAAGAAG GTACTTCTAG AAGACTAAAA
GGATTTAAAA TTATCGACAA GGGAATTGCA AGGCATGGAT ATAAAGTTTT TAAAGATGGA
AAAGAAATTG GTTATGTTAC AAGTGGAACT TTTTCTCCTA CTTTAAATCA AGCAATTGGA
ATGGCCCTAA TAGAGAAAGG ATACAAATCT GGGGAAATAA TCGAAATAGA AATAAGAAAT
AAATTAGTAA AAGCAGAAAT TGTAAAAATG CCATTCTATA GAGGAAGCGT AAAATCTAAA
AAGAAAGGAT GA
 
Protein sequence
MKYTPLYEEH VKLGAKMVDF AGFNMPIQYT SIKDEVLAVR KNVGMFDVSH MGEVIVEGKD 
STKFVDFLIT NDFKNLKPGE IVYTAMCNEN GGFVDDLLAY KISEEKAMLV INASNIEKDF
SWMKKISESF DVTLENKSDE YVLIAVQGPN AQKTLQKITN VDLEQIGYYT FTEGNVLDIK
AIISRTGYTG EDGFEIYTTD KDGIIKIWKK LLNLNVIPAG LGARDCLRLE ASLLLYGNDM
DETITPLEVG IKWAVKFEKD FMGKEALKRQ LEEGTSRRLK GFKIIDKGIA RHGYKVFKDG
KEIGYVTSGT FSPTLNQAIG MALIEKGYKS GEIIEIEIRN KLVKAEIVKM PFYRGSVKSK
KKG