Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1885 |
Symbol | gcvT |
ID | 5297571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1870096 |
End bp | 1871187 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640770152 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_001307103 |
Protein GI | 150021749 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATATA CACCATTATA TGAAGAACAC GTAAAGCTTG GAGCAAAAAT GGTTGATTTT GCTGGATTTA ACATGCCTAT ACAATACACA AGTATTAAAG ATGAAGTATT AGCTGTTAGA AAAAATGTCG GTATGTTTGA CGTTTCTCAC ATGGGGGAGG TAATAGTTGA AGGTAAAGAT TCAACAAAAT TTGTAGATTT TTTAATTACC AATGATTTTA AAAATCTAAA ACCTGGTGAA ATCGTATATA CTGCCATGTG TAATGAAAAC GGTGGATTTG TAGATGATTT ACTTGCATAC AAAATCTCAG AGGAAAAAGC TATGTTGGTA ATCAACGCAT CAAACATTGA AAAAGATTTT AGTTGGATGA AAAAAATTTC AGAATCATTT GACGTAACTC TTGAAAATAA ATCTGATGAA TATGTACTTA TTGCTGTACA AGGTCCAAAC GCTCAAAAAA CATTACAAAA AATTACGAAT GTTGATTTAG AACAAATAGG TTACTACACT TTTACAGAAG GAAATGTGCT GGATATCAAA GCTATAATAT CTAGAACAGG ATATACAGGA GAAGATGGAT TTGAAATTTA TACTACTGAC AAAGATGGAA TTATAAAAAT ATGGAAAAAA CTTTTAAATT TAAACGTAAT TCCTGCAGGA TTGGGTGCAA GAGATTGTTT GAGATTAGAA GCTTCTCTAT TACTATATGG AAACGATATG GATGAAACTA TAACACCTCT TGAAGTAGGT ATAAAATGGG CAGTGAAATT CGAAAAAGAT TTTATGGGAA AAGAAGCACT CAAAAGACAA TTGGAAGAAG GTACTTCTAG AAGACTAAAA GGATTTAAAA TTATCGACAA GGGAATTGCA AGGCATGGAT ATAAAGTTTT TAAAGATGGA AAAGAAATTG GTTATGTTAC AAGTGGAACT TTTTCTCCTA CTTTAAATCA AGCAATTGGA ATGGCCCTAA TAGAGAAAGG ATACAAATCT GGGGAAATAA TCGAAATAGA AATAAGAAAT AAATTAGTAA AAGCAGAAAT TGTAAAAATG CCATTCTATA GAGGAAGCGT AAAATCTAAA AAGAAAGGAT GA
|
Protein sequence | MKYTPLYEEH VKLGAKMVDF AGFNMPIQYT SIKDEVLAVR KNVGMFDVSH MGEVIVEGKD STKFVDFLIT NDFKNLKPGE IVYTAMCNEN GGFVDDLLAY KISEEKAMLV INASNIEKDF SWMKKISESF DVTLENKSDE YVLIAVQGPN AQKTLQKITN VDLEQIGYYT FTEGNVLDIK AIISRTGYTG EDGFEIYTTD KDGIIKIWKK LLNLNVIPAG LGARDCLRLE ASLLLYGNDM DETITPLEVG IKWAVKFEKD FMGKEALKRQ LEEGTSRRLK GFKIIDKGIA RHGYKVFKDG KEIGYVTSGT FSPTLNQAIG MALIEKGYKS GEIIEIEIRN KLVKAEIVKM PFYRGSVKSK KKG
|
| |