| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1859 |
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| Symbol | |
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| ID | 5297917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1844466 |
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| End bp | 1845344 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640770127 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001307078 |
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| Protein GI | 150021724 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000208333 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AAGGAACATG GATGGTTAAA GAGGGTTTTG CTGAAATGTT TAAAGGTGGA
GTTATAATGG ATGTTACTAC TGCAGAGCAG GCAAAGATTG CAGAGGAAGC AGGAGCGGTG
GCTGTAATGG CTTTAGAAAG AGTTCCTGCT GACATTAGAA AAGCAGGTGG AGTAGCTAGA
ATGGCAAATA TTTCAAAAAT TAAGGAAATT ATTGAAGCAG TGTCAATCCC AGTTATGGCA
AAAGTAAGGA TTGGTCACAT TGCTGAAGCA AGAATTTTGG AAGCTTTAGG GGTTGATTTT
ATAGACGAAT CAGAAGTTCT CACTCCTGCG GATGATAAAT ATCATATAAA TAAATGGGAT
TTTAATGTTC CATTTGTATG TGGTGCAAGA AATTTAGGAG AAGCTTTAAG AAGAATTGCT
GAAGGTGCTG CAATGATTAG GACAAAGGGA GAAGCGGGAA CTGGTAATGT TGTGGAAGCA
GTAAAGCATA TGAGAACGGT TATGGATGAA ATAAGAATGG TTCAAAATAT GCCTGATGAG
GAACTGGTAA CATTTGCTAA AAACATAGGT GCACCAGTAA ATTTAGTTGC AAAGGTAAAA
GAATTAGGAA GGCTTCCAGT TGTTAATTTT GCAGCAGGTG GTGTTGCAAC TCCAGCAGAT
GCTGCACTTA TGATGATGTT AGGAGCTGAT GGAGTATTTG TTGGTAGTGG TATTTTTAAA
TCCAAAGATC CCGCTAAAAT GGCAAAAGCA ATAGTAATGG CAGTTACTTA TTGGAATGAT
CCAGAAATGT TATTAAAAAT TTCAGAGGAT ATTGGTCAAC CAATGGAGGG ATTGGAAATA
GAGGAGCTTG ATGTGAAACT CCAAGAAAGG GGTTGGTAA
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| Protein sequence | MSEKGTWMVK EGFAEMFKGG VIMDVTTAEQ AKIAEEAGAV AVMALERVPA DIRKAGGVAR
MANISKIKEI IEAVSIPVMA KVRIGHIAEA RILEALGVDF IDESEVLTPA DDKYHINKWD
FNVPFVCGAR NLGEALRRIA EGAAMIRTKG EAGTGNVVEA VKHMRTVMDE IRMVQNMPDE
ELVTFAKNIG APVNLVAKVK ELGRLPVVNF AAGGVATPAD AALMMMLGAD GVFVGSGIFK
SKDPAKMAKA IVMAVTYWND PEMLLKISED IGQPMEGLEI EELDVKLQER GW
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