Gene Tmel_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1857 
Symbol 
ID5297124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1842742 
End bp1843830 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content30% 
IMG OID640770125 
ProductDNA integrity scanning protein DisA 
Protein accessionYP_001307076 
Protein GI150021722 
COG category[R] General function prediction only 
COG ID[COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.340997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAA GGTGGGATTT TATGGCTATA CCGCAAGAGT TAGTGTCAAA AATTAAATTA 
TTAGCTCCAG GTACGAAACT AAGAAAAGCA TTAGATGATA TTGTTTTGGC AAATTTTGGC
GCGTTAGTAG TTATTTTAAA TGAAGAAAAA TTGGAAGGAT ATAAAAGTTT ATTTCAATCG
GGATTTTGGC TTGATATACC CTTTATGCCA GAAAAGCTCT ATGAACTTGC AAAAATGGAT
GGAGCTATAG TTATTGATGA TAACATAACC AAAATTCTTG CGGCAAATGT ACATCTTGTT
CCTGATGCAA GTATTCCAAC TAGTGAAACA GGAACAAGAC ATAGGACAGC TGAACGAGTG
GCAAAACAGA TAGGAGAATT AGTAATAGCT GTATCTAAAA GAAGAAATGT AATTAGTTTG
TATTACAAGA ATTATAGGTA TATAATTAAT GATATTAATT TTTTGATTAC AAGAGTTAAT
CAAGCTTTAA ATACCTTGGA AAAGTATAGG CAGAATTTCG ATAAGATGAT TTTGAATTTG
GACATTTTAG AGATTGAAAA TAGAGTAAAT TTAATAGATG TTGTTGAAAT AATAAATAAA
GGAATAGAAA TATTAAAAAT ACGAGAAGAA ATAGATCCAT ATGTTATTGA GCTTGGTGTG
GAAGGTAGAT TAGCTTCAAT GCAACTTGAA GAAATTATGG TGGATATGGA GGATATTATT
AGAAATCTTA TATTGGATTA TTATAAAGAG GATATTGAAG ATGAGAATAT GGTGGAACAA
ATAATAAATA CTCTAAAAAA TTACAAAGAA AGAAGACCAA TTTCTACTTC TAGGTTGTTA
GGCTATGATG ACGTCGCTAA TATAAGTCAA TTAAGTGATT ATCATGTACA ATCAAGAGGT
TACAGATTGT TAAGGAACGT TGCAAAAATT CCCATGAATA TAACTCATAA TGTTGTAAAA
GCATTTGGTA ATGTCTTTTC ATTAAGTAAT GCTGATTTTT CGGCTTTAAA AGAAGTTGAA
GGTATTGGTG AGAAAAGAGC TACAGCTATA CTCGATAGTA TAAATTCTAT GAGAAATAGA
ATGAAATAA
 
Protein sequence
MGKRWDFMAI PQELVSKIKL LAPGTKLRKA LDDIVLANFG ALVVILNEEK LEGYKSLFQS 
GFWLDIPFMP EKLYELAKMD GAIVIDDNIT KILAANVHLV PDASIPTSET GTRHRTAERV
AKQIGELVIA VSKRRNVISL YYKNYRYIIN DINFLITRVN QALNTLEKYR QNFDKMILNL
DILEIENRVN LIDVVEIINK GIEILKIREE IDPYVIELGV EGRLASMQLE EIMVDMEDII
RNLILDYYKE DIEDENMVEQ IINTLKNYKE RRPISTSRLL GYDDVANISQ LSDYHVQSRG
YRLLRNVAKI PMNITHNVVK AFGNVFSLSN ADFSALKEVE GIGEKRATAI LDSINSMRNR
MK