Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1849 |
Symbol | |
ID | 5297874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1834363 |
End bp | 1836207 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640770117 |
Product | extracellular solute-binding protein |
Protein accession | YP_001307069 |
Protein GI | 150021715 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000095247 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAGA TTTTGGTATT TTTGATGGTA GTTTTTGCTG TAGCATTATT TGCGGCGGAT CCAAACGTAT TAGTGGATGC AACTATTGGT GAACCAGATA CTCTTGATCC ACATTTGGCA TACGATACGG CAAGCGGTGA AGTCATTTAT CAGGTGTATG AGAATCTTGT TCAGTACGAT GGTTCAAGTC TTAACAAATT CTTACCAAGG CTTGCTGCAG AAGTTCCAAG TGTTGAAAAT GGTTTAATTA GAGATGGTGG TAAAACATAC GTGTTCCCAA TTAGAAAAGG GGTTAAATTC CACAACGGTA ATGATTTAAC GCCAGAAGAT GTAGAATACA GTTTTGAAAG AGGTTTGCTT TACAATCCAG CAGGTGGACC TGTGTGGATG CTCTGGTATT CAATATTTGG TGTTTGGAGT GTAGAGGAAT TTGTAGAAGA AGTTTCAGGA AAATCATATG ATGAGTTATT TGATGAAAAT GGGAATCCAC TTCCAGGTGC CGAAGAAGTA TTCCAAAAAG TTTACGAGGA AGTTGACAAA GCTATTGAAG TAGATGGGGA TAATGTTGTA TTCCATCTTA GAAGACCATA TGGGCCATTT CTAAACGTCA TAGCACAAGG TGGGCATTGG GGTGCAATAT TGGATAAAGA ATGGTGTATC GAACAAGGAC TTTGGGATGG TCAACCAACC ACCTGGTGGA AATGGCACAA TCAAAGGAAA GAAGATTCTC CATTGTATCA GAACGCAATG GGAACAGGTC CATACAAATT TGTTGAGTGG GATAGAGCAC AACAAAAGGT TATATTAGAA GCAAATGAAA ATTACTGGAA AGAACCTGCA AAGATCAAAA AAGTAGTAAT TTGGGGGATT GATGAATATT CCACAAGAAA GGCTATGCTT GAAAAAGGAG ATGCCGATAT TGCATATATT CCAACACAAT ATCTTGATCA AGTAAGAGGA AATCCTGACA TTGAAATTAT AGAAGGACTT CCAACGCTTT CTATTACAGT ATTAGCATTT AATTGGTCAA TTAGAGAAGA TAGTAAATAT ATTGGAAGCG GAAAATTAGA TGGTAATGGT ATTCCAGTTG ATTTCTTTAA CGATGTACAC GCAAGAAAAG CAATAGCACA TGTAATTTAT TATGATGCGC TTATCAATGA TGTGTTGAAA GGCTTTGGAA AAAGAATACC AACGGCGTTA CCAGAAGGTT TACTTGGATT TGATCCATCA TTACCACTTT ATGATTTTAA TTTGATTAAA GCAAGACAAG AATTAATGCA AGCATGGAAT GGTGAAGCAT GGAAAAAAGG ATTTAAATTT TCAGTTGCAT ATAACTTGGG TAACGAAGCA AGACAAAGAA CTGCTGAAAT GGTTAAAATG TATCTTGAAA TGTTAAATCC AAAGATAAAG GTTGATGTTG TTGGATTGCA ATGGCCAACA TTCTTAGATG CGACAAAACG TGGTGAACTT CCAATATTCA TTCTTGGATG GCTTGCAGAC TATCCCGACC CAGATAACTT CATATTCACG TATTACGATT CGAAAGGTGA TTATAGCTCA AGACAAGGTA AAAACTTCCA AGTGTTTGTA AGTACACCGC GTCCAGAACT TGGTGGTAAG AGCTTAGATG ATCTTATCGA AGAAGCAGCA GCTGAAACTG ATGCTGCAAA AAGGGCGGAA TTGTATGCAA AGGTACAAAA ATTTGTAGTT GAAAATGCAA TTAGTGTTCC ACTTTATCAA CCTATTGGTG TGAGGGTTCA CAGAAAATGG CTCAAAGGTT GGTATCCAAA CGCAATGAGA CCAGGTGACG ATTATTACGC ATACTGGTTT GAAGGAAAAG AATAA
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Protein sequence | MKKILVFLMV VFAVALFAAD PNVLVDATIG EPDTLDPHLA YDTASGEVIY QVYENLVQYD GSSLNKFLPR LAAEVPSVEN GLIRDGGKTY VFPIRKGVKF HNGNDLTPED VEYSFERGLL YNPAGGPVWM LWYSIFGVWS VEEFVEEVSG KSYDELFDEN GNPLPGAEEV FQKVYEEVDK AIEVDGDNVV FHLRRPYGPF LNVIAQGGHW GAILDKEWCI EQGLWDGQPT TWWKWHNQRK EDSPLYQNAM GTGPYKFVEW DRAQQKVILE ANENYWKEPA KIKKVVIWGI DEYSTRKAML EKGDADIAYI PTQYLDQVRG NPDIEIIEGL PTLSITVLAF NWSIREDSKY IGSGKLDGNG IPVDFFNDVH ARKAIAHVIY YDALINDVLK GFGKRIPTAL PEGLLGFDPS LPLYDFNLIK ARQELMQAWN GEAWKKGFKF SVAYNLGNEA RQRTAEMVKM YLEMLNPKIK VDVVGLQWPT FLDATKRGEL PIFILGWLAD YPDPDNFIFT YYDSKGDYSS RQGKNFQVFV STPRPELGGK SLDDLIEEAA AETDAAKRAE LYAKVQKFVV ENAISVPLYQ PIGVRVHRKW LKGWYPNAMR PGDDYYAYWF EGKE
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