| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1848 |
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| Symbol | |
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| ID | 5297873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1832677 |
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| End bp | 1834281 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640770116 |
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| Product | fibronectin-binding A domain-containing protein |
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| Protein accession | YP_001307068 |
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| Protein GI | 150021714 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTACG ATGGTTTTGT AATGAGAAGA TTTATCGATT ATGCCAGAAA AAGGCTTATT
GGTTCTTATA TAAAAAATTT TTATTTTCAA AAAAATGTTA TATATATTGC TTTTCAGGAT
GTTGATTTGA AAATTTCATT AAACCCGAGT TATTCATATA TTACTTTTGA AAAGAGAAAT
ATTTCCAATG TGGTTAAACA TCATTTTGTT GATTTTTTAA GAAGTAGGGT AAAGGGTGGA
AGGTTAAAAG ATATAATTAC TTTTGGTTTT GAAAGAACTG TGAAATTTGT TGTGGAAAAG
GTTGATGAAA TTGGGATAGC TCATGAATAC GAAATGTATG TTGATATAAT GGGAAAACAT
TCTAATATGA TTTTAGTGGA AAACGGTGTG ATTTTAGATG CATATAGACG TGTGAAAAAT
CGATTTAGAA ATATATATCC AGGTGAAATT TTTGTATTTT ATAAATCGGA TAAGATTAAT
CCTTACAATG TTAGTAATAT AAAAAATATT GAAAAACTTT ATTTAGAAGT GCAAGGTTTT
TCAAAAATAA CAGTTAGAGA GTTAATTTAT AGAATGCAAT TTTTGGATTT TCATAAAGCA
TTAAAAAGTA TTTTGAGAGA CTTTGAAAAA GGTTGTTTAT ATGTTTTTTA TCAAAATAAT
GTTCCTATTG AAATTTCTGC CTTCCCTCTT AATCATATAA ATGCAATTAA AAAAAAGTAT
TGTAAGGAAT TAGAGAATGC AATTAGTGAT TTTTTTGGAT TTGTTGAGAG AAATAATATA
TTAAAACAGT TAAAGAAAAA TTTGGAAAAT ATAATAGTTA AGAATGTTGT GAAAATTGAA
AATACACTTG AAAAGATAAA TAGAGAATTG CAAGAAATAA AAGATTATGA GCATTATAGA
AAATATGGGG AGCTTTTAAA GGCTTATTTT TATCAAATCC CCATTGGAAC TAAAGAAGTT
GAATTATTTG ATTGGGAAAA TAATGAAAAT ATAATTGTTC CATTGGATCC TAATAAAGAT
GCAATTGAGA ATGCAAGTAG TTATTTTAAA AAGTATAATA AATTGAAAAC AAAATTGAAA
GGACTTTTAA ATAGAAAAAA GTATTTGGAA AAAGAGTTGA ATTATCTTTA TCAATTATGG
TATACGTTGG AGGAAGTAGA TGACCTCAAT GAAGTTGAAG ATATAAAGTC TGAGATGGAA
GATGTAGGAA TATTAAAAGT TAGAAAACGA AGAAAAAATA ACGTAAAATC AGAACCTATA
AAAGTTAGTT TTAAAAATCA TTCTATTTAT ATAGGAAAAA ACAACAAACA AAATGATGAA
TTAGTTAGAA ATAGTTCAGA TGAGGATATT TGGCTTCATG TTAGTGGTAT GCCAGGAGCT
CATGTGATTA TAAAGCATGC AGGAAGGGAA ATAACAAATG ATGTAATTGA ATACGCAGCT
TCTTTAGCTG CGGGTTATAG TAAAGGAAAG AATTCTGGAA AGGTTCTAGT TGATTATACA
AAAGCAAAAA ATGTAAGAAA AGTAAAGGGA TTAAAACCAG GAATGGTTTT ATATTATAAC
TATAGAACCA TAATTGTAAA TCCTAGGAGG ATAGATGATG TTTAG
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| Protein sequence | MPYDGFVMRR FIDYARKRLI GSYIKNFYFQ KNVIYIAFQD VDLKISLNPS YSYITFEKRN
ISNVVKHHFV DFLRSRVKGG RLKDIITFGF ERTVKFVVEK VDEIGIAHEY EMYVDIMGKH
SNMILVENGV ILDAYRRVKN RFRNIYPGEI FVFYKSDKIN PYNVSNIKNI EKLYLEVQGF
SKITVRELIY RMQFLDFHKA LKSILRDFEK GCLYVFYQNN VPIEISAFPL NHINAIKKKY
CKELENAISD FFGFVERNNI LKQLKKNLEN IIVKNVVKIE NTLEKINREL QEIKDYEHYR
KYGELLKAYF YQIPIGTKEV ELFDWENNEN IIVPLDPNKD AIENASSYFK KYNKLKTKLK
GLLNRKKYLE KELNYLYQLW YTLEEVDDLN EVEDIKSEME DVGILKVRKR RKNNVKSEPI
KVSFKNHSIY IGKNNKQNDE LVRNSSDEDI WLHVSGMPGA HVIIKHAGRE ITNDVIEYAA
SLAAGYSKGK NSGKVLVDYT KAKNVRKVKG LKPGMVLYYN YRTIIVNPRR IDDV
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