| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1846 |
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| Symbol | |
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| ID | 5297730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1829847 |
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| End bp | 1830659 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640770114 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001307066 |
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| Protein GI | 150021712 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.726125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA TAGGTGATAT CATATTAAAA GCAAACAATG AATTAAAAGA AAAAGCCTTA
TTTCCACTAT TTTCTATATT TGTGGTTGAT ATAGTAGGAA CAATTGAAAA AAGGGAATTT
TTGGAAAAAC TTTGTAAAAG TATTTTTAAT ATACTCCATT CTGTAGTTGG AGTTATTGTT
TTGGAGAATG AGAAAATAGT TTATAAGTAT GGCAATTTTG ATAGTGAATT CATTGATTTT
AGTTTAGATA AAATAATGAT AAAGATTTAT CACAAGGAGA TAAGCAATTT TGAGGAAAAT
TTATTAAAAT ATATATTAGC TATTGCGGAA ATTCATTATG ACAATGTAAA GAAATTTGAA
ATTATGAAAG AAAATGCGTT TTTTGATGAA CTTACAGGTG CATTAACAAG AAAAGCTGGG
TTTGAAATGC TTTCAAAAAA GTTTCACGAG CTTAAGAGGG AAAATAAAAT TGGTACACTG
ATATTTATTG ATTTAGATGG ATTAAAAAAA GTTAATGATT TGCATGGTCA CTTAGAAGGA
GATAAATTAT TAAAGGAATT TGTGTATGTT TCAAAAGAGT TTATTAGAAA AGGTGATTTT
GTAGTAAGGT TAGGCGGTGA TGAATTTGTT ATATTCGTTA ATAGTGAACA TGGAGATGCT
ATTGTAAGTA GAATAAAGAA TCATACTAGA GCAAACTTTT CATGGGGAAG TGTAAACATT
CCAGCCGGAT TTAAAGATAT TGTTGAAGCT ATTGAAAAAG CTGATAAGAA AATGTACAAA
CAAAAGATTT TAAAAAAATA TAAAAAACAA TAA
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| Protein sequence | MSKIGDIILK ANNELKEKAL FPLFSIFVVD IVGTIEKREF LEKLCKSIFN ILHSVVGVIV
LENEKIVYKY GNFDSEFIDF SLDKIMIKIY HKEISNFEEN LLKYILAIAE IHYDNVKKFE
IMKENAFFDE LTGALTRKAG FEMLSKKFHE LKRENKIGTL IFIDLDGLKK VNDLHGHLEG
DKLLKEFVYV SKEFIRKGDF VVRLGGDEFV IFVNSEHGDA IVSRIKNHTR ANFSWGSVNI
PAGFKDIVEA IEKADKKMYK QKILKKYKKQ
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