Gene Tmel_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1836 
Symbol 
ID5297064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1819254 
End bp1819988 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content27% 
IMG OID640770104 
Productcobalt transport protein 
Protein accessionYP_001307056 
Protein GI150021702 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.507525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTTG CTTTTGGAAG ATATGTACCT ACAAGCTCTA TAATCCATTC ACTAGATCCA 
AGAGTGAAAA CTATTTCGTC ATTTGTATTT GTTGTTTCTG TTTTGTTTGT TAAAGGATTT
ATGGGTTATT TATTTTTATT TGGAATTTTT TTGATTATTG CATTTTTATC AAATATAAAG
TTGATTTTGT ATTTAAAATC TGTGAAAAAT ATGTGGTTTT TGATAGTTTT TGCTTCGTTA
ATTCAATTTT TTATCAGTGG TTTTCAAATG GCTATGTTTA TTTCTTTAAG ACTTATTTTT
GTGGTTTTGT TTGCTTCGTT CTTAACATAT ACTACATCTC CATTATTAAT TGCAAGGGGA
TTGTCAGAAC TTTTAAGATT TTTTGGAGTT AAGAAAAGAT ATCGTGATGA TTTTGGTATG
ATAATGACTA TTTCTTTTAG ATTTATCCCT ATTTTATTTG ATGAAATTGA TAGGATTATT
AAAGCTCAGA TAGCACGAGG GGCAAAATTC GATGAAAAAG GGTTAAAGTA TAAAATTCAA
GGAGTTGTTG CAATTGTAGT TCCATTACTT GTTTCTTCTA TAAGAAAAGC TGAAGAAATT
TCTATTGCAT TACAAGCAAG AAAATATGGT GTGTTTGAGA GAAACAGTTA TTATACTCTA
AAATGGAAGT TTAAAGATAC ATTGTTTTTT GTCTTTTCTT TTTTAGTGTT GTTTTTAATA
GTTGTTTTTA GTTGA
 
Protein sequence
MRFAFGRYVP TSSIIHSLDP RVKTISSFVF VVSVLFVKGF MGYLFLFGIF LIIAFLSNIK 
LILYLKSVKN MWFLIVFASL IQFFISGFQM AMFISLRLIF VVLFASFLTY TTSPLLIARG
LSELLRFFGV KKRYRDDFGM IMTISFRFIP ILFDEIDRII KAQIARGAKF DEKGLKYKIQ
GVVAIVVPLL VSSIRKAEEI SIALQARKYG VFERNSYYTL KWKFKDTLFF VFSFLVLFLI
VVFS