Gene Tmel_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1832 
Symbol 
ID5297120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1816091 
End bp1816516 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content24% 
IMG OID640770100 
ProductMarR family transcriptional regulator 
Protein accessionYP_001307052 
Protein GI150021698 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAG AAACTATCTT TAAATCTATA TTTGAACTAG TGGTTAATTT TACTCAATTT 
TTTAACCAAA AACCTATATT TTCAAAAATG ACAACAAATG AATTTTATCT ATTTCTTTTC
ATAAATTTTT ATGCTCCCGT CTCAATGAAG TACTGCTCGG AAAAAATAGA ACTTTCAAAG
AGTACTATTA CAGTACTAAT TGATAAATTG GAAAATAAAA ATCTAGTAAT ACGAAAACGT
TCTAAAAAAG ATAGAAGGGT AATACATATC TTTCCAACAA ATAGAGGAAA AAAATTATTT
GAAAATTTTT CAAGTGAATT TTACAAGATA ATTGAAGTTA TATCTTCAAA AATTCCAAAT
AATGAATTAG AAATCATCAA CAAGGGTTTT GAATTATTCA TTAAAAACAT ATTTGGAGGC
GAATGA
 
Protein sequence
MDKETIFKSI FELVVNFTQF FNQKPIFSKM TTNEFYLFLF INFYAPVSMK YCSEKIELSK 
STITVLIDKL ENKNLVIRKR SKKDRRVIHI FPTNRGKKLF ENFSSEFYKI IEVISSKIPN
NELEIINKGF ELFIKNIFGG E