| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1814 |
|---|
| Symbol | |
|---|
| ID | 5297270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1797206 |
|---|
| End bp | 1798144 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640770082 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001307034 |
|---|
| Protein GI | 150021680 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATGA ATTTAAAAGG AAAATCGTTA TTAACCTTAC TTGATTTTTC TACAGATGAA
ATAAGGTATT TGTTAGATAT ATCAAAAACA TGTAAAGCTG ATAGTAGAGC AGGAATAGTT
CATCAAAGAT TTAAAGGAAA AACACTTGCA ATGATATTTG AAAAAAGATC AACAAGAACA
AGGGTTGCTT TTGAAACGGC ATTTGGTGAG GAAGGTGGAC ATCCATTATT TTTATCAACG
CAGGATATTC AGCTTGGAGC AAAAGAGTCT ATAGAGGATA CGGCAAGAGT ATTAGGAAGA
ATGGTAGATG CGATAATGTT TAGAGGTTTT AAACAAGAAA CAGTTGAAAT TTTGGCAAAG
TATTCTGGTG TGCCTGTTTA CAATGCATTA ACTGATTTAT ATCATCCAAC GCAAGTTTTG
GCTGATTTGA TGACTATCGA AGAAAACTTT GGGAGATTAA GGGGTATAAA ACTTGTATTT
ATGGGTGACG GAAGAAATAA TATGGCTAAT TCATTGATGA TAGGTTCTGC AAAAATGGGA
TTGCATTACG TAATCTGTTC ACCAAAAGAA TTAAGACCAA ATGAGGAATT GACAAAAAAA
TGTATGGAAG TTGCAAAAGA GACAGGGGCG GTAATTGAGT TTACGGACAA TGTTGATGAA
GCAGTTAAAG GTGCAGATGT AATTTATACG GATGTTTGGG CTTCTATGGG TGAAGAATCA
AAAGCAGAGG AAAGAAGAAA ACTTCTCATG CCTTACCAAG TAAATGAAGA AGTTATGAAA
AAGACCGGTA AACCAGAAAC TATATTTATG CATTGTTTAC CAGCAGTAAA AGGTGAGGAA
GTAACTTTTG ATGTTATTGA AGGTCTCCAA AGTAGAGTTT GGGATGAAGC TGAAAACAGG
AAACATACGA TAAAAGCTGT TATGTTAGCA ACGATATAA
|
|---|
| Protein sequence | MGMNLKGKSL LTLLDFSTDE IRYLLDISKT CKADSRAGIV HQRFKGKTLA MIFEKRSTRT
RVAFETAFGE EGGHPLFLST QDIQLGAKES IEDTARVLGR MVDAIMFRGF KQETVEILAK
YSGVPVYNAL TDLYHPTQVL ADLMTIEENF GRLRGIKLVF MGDGRNNMAN SLMIGSAKMG
LHYVICSPKE LRPNEELTKK CMEVAKETGA VIEFTDNVDE AVKGADVIYT DVWASMGEES
KAEERRKLLM PYQVNEEVMK KTGKPETIFM HCLPAVKGEE VTFDVIEGLQ SRVWDEAENR
KHTIKAVMLA TI
|
|---|
| |