| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1803 |
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| Symbol | |
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| ID | 5297346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1787947 |
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| End bp | 1788483 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640770071 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001307023 |
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| Protein GI | 150021669 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000356142 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAA CTCTCCATGA GCTTTTAAAA GATAAAGTCC CCATTGCAGT TTTGGGAAAA
ACTCATGGGC TTAATGGAGA GTTAAGATTG TTTCCGCTAA CAAATATGCC AGAGGTGATT
GAATCATTAG AAGAGGTATT TATTTATAAC GAAAAGGTGA AAAAACTTTT GATTGGTAGA
ATAATTCATA TGTCTCTTGC AAATGGATAT TATATTGTTA AATTTAGAGG TATTGATACA
CTAAATGATG CTAAAAAGTT TGTTGGTTCC ACACTTTATA TTGAAAAATC AAGGTTACCA
ATTCTTTCTA GTGACGAGTA TTATTTTTAC GAAGTTATTG GAATGAAAGT TTACGATGAA
AAAGGTATTT TTTTGGGGAA TATCGATGAA GTAATTCAAA CAGGTAGCAA TGATGTGTTT
GTTATTAATA AGGATACCAA AGATGAAATA TTGATACCTG TAATTAAAGA ATATGTTTTG
CAAATTGATA AAAAGAGTAA CAAAATTGTT GTAAAATTAC CGGAGTGGTT GGATTGA
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| Protein sequence | MIKTLHELLK DKVPIAVLGK THGLNGELRL FPLTNMPEVI ESLEEVFIYN EKVKKLLIGR
IIHMSLANGY YIVKFRGIDT LNDAKKFVGS TLYIEKSRLP ILSSDEYYFY EVIGMKVYDE
KGIFLGNIDE VIQTGSNDVF VINKDTKDEI LIPVIKEYVL QIDKKSNKIV VKLPEWLD
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