| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1798 |
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| Symbol | |
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| ID | 5297176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1782906 |
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| End bp | 1785392 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640770066 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001307018 |
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| Protein GI | 150021664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.362346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATTA CAAAAAGAAA AAAGGAACAA AAATACAGAA CCTCTAAAAA AAACATCAAG
GAAAACTTTA TCGAGCACCT CAATCTATCA TTGGGGAAGG ATTTTTCAAA TGCAACACTT
TGGGATAAAT ATCATGCACT TGCACTGTTA GTAAAAGACA GGGTAGTAGA AAAATGGCTT
AAAACACAAA AAAAGTATTA TGAAACCACT GATGTAAAAA GGGTATATTA TCTATCCATT
GAATTTCTAA TTGGTAGACT ACTTTATAAT AACCTTTTAA ACTTACAAAT TGATGAAGAA
GTAAAAAAAG CTATGAAAGA TTTAAACTTA AGTTTAGAAG AAATAGCAGA AGCTGAACCA
GATGCCGGTC TTGGAAATGG TGGATTAGGT AGATTAGCTG CTTGCTTTTT AGACTCAATT
GCAACTTTGG GTCTGCCTGG ATACGGTTAT GGAATAAGAT ATGATTATGG AATCTTCAAA
CAAGTTATTA AAGATGGTTT TCAAATAGAG CTTCCAGATG ACTGGCTTAA AAATGGAAAT
CCCTGGGAAA TAGAGAGAAA AGATAGAACA GTAAAAGTTA AATTCTTTGG TAGAAGTGAA
AGTTATAAAG ATGAAGATGG AAATATAAGA TTTAAATGGG TAGATACTTT TGATGTTTTA
GCTGTTCCAT ATGATACTCC CATTATTGGT TACGGAAATA ATGTTGCAAA TACTTTAAGA
CTTTGGAGTG CAAAGGCATT AAATGAATTT GATTTTAATA ATTTCCAAAA AGGAAATTAT
ATTAAATCTG CTGAGTCCAA TGCAATTGCA AGTGCTATTT CAAAAGTTCT TTATCCAAAC
GATGCGTTTT ATTCAGGAAG AGAATTAAGG TTAAAGCAAG AATATTTCTT TGTTTCTGCT
TCTCTCCAGG ACATTATCAG AAGATTTAAA AAACAATTTG GAAATCAATT TGACCTTTTC
CCTAAAAGAA ACGTCATACA ACTTAATGAT ACCCATCCCG CACTTGCCAT TCCCGAATTA
ATGCGCATTT TAGTTGATGA AGAACATTTG CCGTGGGAAA AAGCCTGGGA TATCACCATC
AAAACTTTTG CTTACACCAA CCATACTGTA ATGCCCGAAG CATTGGAAAA ATGGGAAGTT
CATCTGTTTG AAAGACTTCT TCCAAGACAC CTTGAAATAC TTTACGAAAT TAATGCACGA
TTCCTAGATA ACGCCAAAAA AATTTTCAAT GGAAATATAG AAAAAATTAG GAATGTCTCA
ATTTTTGAAG AAGGGAATGT TAAACAAGTA AGAATGGCAA ATTTATCAAT TGTCGGTTCA
TTTTCCATAA ATGGAGTTTC AAAACTTCAT ACTGAGATAC TAAAGAAAAA TGTCTTTAAA
GATTTTTACG AAATATGGCC TGAAAAATTC AACAACAAAA CAAATGGTAT TACTCAAAGA
AGATGGTTAC TGCAATGTAA TCCAGGTTTA TCAAAAATTA TTAATGAAAC TATTGGTAGC
GAATGGATAA CAAATCTAGA TTACTTAAAA AATTTGGAAA AATTTGCAGA TGATAAAAGT
TTCTTAGACA AATTTTACGA AGTAAAACAA AATAACAAGA TAAGGCTTTC AAGATACATA
GAAAAAGAAT TGGATATAAA GGTTGATCCT GAATCTATAT TCGATGTACA GGTAAAAAGA
CTACATGAAT ATAAACGTCA ACTTCTAAAT GTCATGCATA TTATTTACAT TTATCAAAGA
TTAAAAGAAA ATCCAAATTT AGACATATAC CCGAGAACCT TTATTTTTGG TGCAAAAGCT
GCACCAGGTT ATAGAATGGC AAAGTTAATT ATTAAATTAA TTAACAGCGT AGCAAACGTA
GTAAATAACG ACAAAGACAT TAAAGACAAA ATAAAGGTTA TATTTATACC AAATTACAAT
GTATCCTTGG CTGAAATTAT AATCCCAGCT GCTAACGTAA GCGAACAAAT TTCAACTGCA
GGTAAAGAAG CATCTGGGAC TGGGAACATG AAATTTGCAT TAAATGGTGC ACTTACCATT
GGAACCTTAG ATGGTGCAAA TATTGAAATT AAAGAATGTG TTGGTGATGA AAACATCTTT
ATATTTGGTC TAACAGCAGA ACAAGTTTCT AAACTAAAAG AAAGTAGGTT ATACAATCCA
TATGACATAT ATTTAAGAAA TGAACACATT AGAAACATAT TAGATGCTAT AAATAATAGT
TTCTTTGAAA AAAATAATCC TGATCTGTTT AAAGATATTT TCCAATCACT ATTATTCGGT
ATAAATGGCT CACAAGCAGA CGAATACATG CTCTTAGCAG ATTTTGACAG TTATAAGACA
AGACATAAGG AAATTGATTT GACATACAGA AATAAATATA CCTGGAACAA AAAAGCACTT
TTAAACGTAG CAAGGGTAGG AATCTTTTCC AGTGATAGGA CCATTCGAGA ATATGCAGAA
GATATATGGA AAGTTAAAAA GATCTAA
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| Protein sequence | MEITKRKKEQ KYRTSKKNIK ENFIEHLNLS LGKDFSNATL WDKYHALALL VKDRVVEKWL
KTQKKYYETT DVKRVYYLSI EFLIGRLLYN NLLNLQIDEE VKKAMKDLNL SLEEIAEAEP
DAGLGNGGLG RLAACFLDSI ATLGLPGYGY GIRYDYGIFK QVIKDGFQIE LPDDWLKNGN
PWEIERKDRT VKVKFFGRSE SYKDEDGNIR FKWVDTFDVL AVPYDTPIIG YGNNVANTLR
LWSAKALNEF DFNNFQKGNY IKSAESNAIA SAISKVLYPN DAFYSGRELR LKQEYFFVSA
SLQDIIRRFK KQFGNQFDLF PKRNVIQLND THPALAIPEL MRILVDEEHL PWEKAWDITI
KTFAYTNHTV MPEALEKWEV HLFERLLPRH LEILYEINAR FLDNAKKIFN GNIEKIRNVS
IFEEGNVKQV RMANLSIVGS FSINGVSKLH TEILKKNVFK DFYEIWPEKF NNKTNGITQR
RWLLQCNPGL SKIINETIGS EWITNLDYLK NLEKFADDKS FLDKFYEVKQ NNKIRLSRYI
EKELDIKVDP ESIFDVQVKR LHEYKRQLLN VMHIIYIYQR LKENPNLDIY PRTFIFGAKA
APGYRMAKLI IKLINSVANV VNNDKDIKDK IKVIFIPNYN VSLAEIIIPA ANVSEQISTA
GKEASGTGNM KFALNGALTI GTLDGANIEI KECVGDENIF IFGLTAEQVS KLKESRLYNP
YDIYLRNEHI RNILDAINNS FFEKNNPDLF KDIFQSLLFG INGSQADEYM LLADFDSYKT
RHKEIDLTYR NKYTWNKKAL LNVARVGIFS SDRTIREYAE DIWKVKKI
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